Cluster: C89.bin_3_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: C89.bin_3
- CGC Family ID: CGCFAM_00445
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C89_contig_14 | C89_contig_14_208 | 262781 | 263554 | + | 1.B.6.7.1 |
| TF | C89_contig_14 | C89_contig_14_209 | 263709 | 264065 | + | HTH_3 |
| NULL(UNKNOWN) | C89_contig_14 | C89_contig_14_210 | 264316 | 266604 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C89_contig_14 | C89_contig_14_211 | 266729 | 268597 | + | GH32 |
| TC | C89_contig_14 | C89_contig_14_212 | 268643 | 269809 | + | 2.A.1.7.17 |
Gene ID: C89_contig_14_208
Type: TC
Location: 262781 - 263554 (+)
Type: TC
Location: 262781 - 263554 (+)
Gene ID: C89_contig_14_209
Type: TF
Location: 263709 - 264065 (+)
Type: TF
Location: 263709 - 264065 (+)
Gene ID: C89_contig_14_210
Type:
Location: 264316 - 266604 (+)
Type:
Location: 264316 - 266604 (+)
Gene ID: C89_contig_14_211
Type: CAZyme
Location: 266729 - 268597 (+)
Type: CAZyme
Location: 266729 - 268597 (+)
Gene ID: C89_contig_14_212
Type: TC
Location: 268643 - 269809 (+)
Type: TC
Location: 268643 - 269809 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides fragilis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.