Cluster: C89.bin_3_CGC75
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: C89.bin_3
- CGC Family ID: CGCFAM_00018
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C89_contig_31 | C89_contig_31_1050 | 1378776 | 1379801 | + | 9.B.18.2.1 |
| pfam | C89_contig_31 | C89_contig_31_1051 | 1379846 | 1380997 | + | Epimerase | Polysacc_synt_2 | NAD_binding_4 | Polysacc_synt_C |
| pfam | C89_contig_31 | C89_contig_31_1052 | 1381005 | 1382189 | + | Epimerase_2 |
| CAZyme | C89_contig_31 | C89_contig_31_1053 | 1382200 | 1383408 | + | GT4 |
| TC | C89_contig_31 | C89_contig_31_1054 | 1383411 | 1384019 | + | 9.B.18.1.2 |
Gene ID: C89_contig_31_1050
Type: TC
Location: 1378776 - 1379801 (+)
Type: TC
Location: 1378776 - 1379801 (+)
Gene ID: C89_contig_31_1051
Type: pfam
Location: 1379846 - 1380997 (+)
Type: pfam
Location: 1379846 - 1380997 (+)
Gene ID: C89_contig_31_1052
Type: pfam
Location: 1381005 - 1382189 (+)
Type: pfam
Location: 1381005 - 1382189 (+)
Gene ID: C89_contig_31_1053
Type: CAZyme
Location: 1382200 - 1383408 (+)
Type: CAZyme
Location: 1382200 - 1383408 (+)
Gene ID: C89_contig_31_1054
Type: TC
Location: 1383411 - 1384019 (+)
Type: TC
Location: 1383411 - 1384019 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides fragilis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.