Cluster: C89.bin_3_CGC21
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 5
- Substrate:
- Genome ID: C89.bin_3
- CGC Family ID: CGCFAM_00007
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C89_contig_14 | C89_contig_14_811 | 994936 | 996180 | + | 2.A.66.2.10 |
| pfam | C89_contig_14 | C89_contig_14_812 | 996186 | 996971 | + | LicD |
| NULL(UNKNOWN) | C89_contig_14 | C89_contig_14_813 | 996986 | 998311 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C89_contig_14 | C89_contig_14_814 | 998340 | 999311 | + | GT2 |
| pfam | C89_contig_14 | C89_contig_14_815 | 999327 | 1000613 | + | UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| CAZyme | C89_contig_14 | C89_contig_14_816 | 1000600 | 1001733 | + | GT4 |
| CAZyme | C89_contig_14 | C89_contig_14_817 | 1001726 | 1002505 | + | CE4 |
| CAZyme | C89_contig_14 | C89_contig_14_818 | 1002560 | 1003783 | + | GT4 |
| CAZyme | C89_contig_14 | C89_contig_14_819 | 1003800 | 1004564 | + | GT2 |
Gene ID: C89_contig_14_811
Type: TC
Location: 994936 - 996180 (+)
Type: TC
Location: 994936 - 996180 (+)
Gene ID: C89_contig_14_812
Type: pfam
Location: 996186 - 996971 (+)
Type: pfam
Location: 996186 - 996971 (+)
Gene ID: C89_contig_14_813
Type:
Location: 996986 - 998311 (+)
Type:
Location: 996986 - 998311 (+)
Gene ID: C89_contig_14_814
Type: CAZyme
Location: 998340 - 999311 (+)
Type: CAZyme
Location: 998340 - 999311 (+)
Gene ID: C89_contig_14_815
Type: pfam
Location: 999327 - 1000613 (+)
Type: pfam
Location: 999327 - 1000613 (+)
Gene ID: C89_contig_14_816
Type: CAZyme
Location: 1000600 - 1001733 (+)
Type: CAZyme
Location: 1000600 - 1001733 (+)
Gene ID: C89_contig_14_817
Type: CAZyme
Location: 1001726 - 1002505 (+)
Type: CAZyme
Location: 1001726 - 1002505 (+)
Gene ID: C89_contig_14_818
Type: CAZyme
Location: 1002560 - 1003783 (+)
Type: CAZyme
Location: 1002560 - 1003783 (+)
Gene ID: C89_contig_14_819
Type: CAZyme
Location: 1003800 - 1004564 (+)
Type: CAZyme
Location: 1003800 - 1004564 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides fragilis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.