Cluster: C89.bin_3_CGC29
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: C89.bin_3
- CGC Family ID: CGCFAM_00003
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C89_contig_14 | C89_contig_14_1522 | 1805237 | 1806187 | - | 9.B.146.1.7 |
| pfam | C89_contig_14 | C89_contig_14_1523 | 1806191 | 1807198 | - | 3Beta_HSD | Epimerase |
| CAZyme | C89_contig_14 | C89_contig_14_1524 | 1807195 | 1807920 | - | GT2 |
| CAZyme | C89_contig_14 | C89_contig_14_1525 | 1807963 | 1809168 | - | GT4 |
| CAZyme | C89_contig_14 | C89_contig_14_1526 | 1809176 | 1810204 | - | GT4 |
| CAZyme | C89_contig_14 | C89_contig_14_1527 | 1810211 | 1811296 | - | GT4 |
| NULL(UNKNOWN) | C89_contig_14 | C89_contig_14_1528 | 1811289 | 1812575 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C89_contig_14 | C89_contig_14_1529 | 1812577 | 1814022 | - | 2.A.66.2.6 |
Gene ID: C89_contig_14_1522
Type: TC
Location: 1805237 - 1806187 (-)
Type: TC
Location: 1805237 - 1806187 (-)
Gene ID: C89_contig_14_1523
Type: pfam
Location: 1806191 - 1807198 (-)
Type: pfam
Location: 1806191 - 1807198 (-)
Gene ID: C89_contig_14_1524
Type: CAZyme
Location: 1807195 - 1807920 (-)
Type: CAZyme
Location: 1807195 - 1807920 (-)
Gene ID: C89_contig_14_1525
Type: CAZyme
Location: 1807963 - 1809168 (-)
Type: CAZyme
Location: 1807963 - 1809168 (-)
Gene ID: C89_contig_14_1526
Type: CAZyme
Location: 1809176 - 1810204 (-)
Type: CAZyme
Location: 1809176 - 1810204 (-)
Gene ID: C89_contig_14_1527
Type: CAZyme
Location: 1810211 - 1811296 (-)
Type: CAZyme
Location: 1810211 - 1811296 (-)
Gene ID: C89_contig_14_1528
Type:
Location: 1811289 - 1812575 (-)
Type:
Location: 1811289 - 1812575 (-)
Gene ID: C89_contig_14_1529
Type: TC
Location: 1812577 - 1814022 (-)
Type: TC
Location: 1812577 - 1814022 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides fragilis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.