Cluster: C89.bin_3_CGC31
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 8
- Substrate: host glycan
- Genome ID: C89.bin_3
- CGC Family ID: CGCFAM_00194
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C89_contig_14 | C89_contig_14_1618 | 1921397 | 1924141 | - | 1.B.14.6.1 |
| CAZyme | C89_contig_14 | C89_contig_14_1619 | 1924238 | 1926739 | - | GH2 |
| CAZyme | C89_contig_14 | C89_contig_14_1620 | 1926753 | 1929002 | - | GH92 |
| CAZyme | C89_contig_14 | C89_contig_14_1621 | 1929063 | 1931135 | - | GH20 |
| pfam | C89_contig_14 | C89_contig_14_1622 | 1931203 | 1932417 | - | NANM | NANM |
| CAZyme | C89_contig_14 | C89_contig_14_1623 | 1932428 | 1934752 | - | CBM32 | GH20 |
| CAZyme | C89_contig_14 | C89_contig_14_1624 | 1934772 | 1937342 | - | GH2 |
| CAZyme | C89_contig_14 | C89_contig_14_1625 | 1937364 | 1939436 | - | CE20 |
| sulfatase | C89_contig_14 | C89_contig_14_1626 | 1939433 | 1940095 | - | S1_16 |
| CAZyme | C89_contig_14 | C89_contig_14_1627 | 1940116 | 1942128 | - | GH20 |
| CAZyme | C89_contig_14 | C89_contig_14_1628 | 1942160 | 1943794 | - | CBM93 | GH33 |
| NULL(UNKNOWN) | C89_contig_14 | C89_contig_14_1629 | 1943847 | 1944035 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | C89_contig_14 | C89_contig_14_1630 | 1944078 | 1946093 | - | SusD_RagB | SusD-like_3 |
| TC | C89_contig_14 | C89_contig_14_1631 | 1946105 | 1949275 | - | 1.B.14.6.1 |
| TC | C89_contig_14 | C89_contig_14_1632 | 1950037 | 1953360 | + | 1.B.14.6.2 |
| TC | C89_contig_14 | C89_contig_14_1633 | 1953378 | 1954940 | + | 8.A.46.1.4 |
| TC | C89_contig_14 | C89_contig_14_1634 | 1955055 | 1956626 | - | 8.A.46.1.4 |
| TC | C89_contig_14 | C89_contig_14_1635 | 1956654 | 1959923 | - | 1.B.14.6.1 |
Gene ID: C89_contig_14_1618
Type: TC
Location: 1921397 - 1924141 (-)
Type: TC
Location: 1921397 - 1924141 (-)
Gene ID: C89_contig_14_1619
Type: CAZyme
Location: 1924238 - 1926739 (-)
Type: CAZyme
Location: 1924238 - 1926739 (-)
Gene ID: C89_contig_14_1620
Type: CAZyme
Location: 1926753 - 1929002 (-)
Type: CAZyme
Location: 1926753 - 1929002 (-)
Gene ID: C89_contig_14_1621
Type: CAZyme
Location: 1929063 - 1931135 (-)
Type: CAZyme
Location: 1929063 - 1931135 (-)
Gene ID: C89_contig_14_1622
Type: pfam
Location: 1931203 - 1932417 (-)
Type: pfam
Location: 1931203 - 1932417 (-)
Gene ID: C89_contig_14_1623
Type: CAZyme
Location: 1932428 - 1934752 (-)
Type: CAZyme
Location: 1932428 - 1934752 (-)
Gene ID: C89_contig_14_1624
Type: CAZyme
Location: 1934772 - 1937342 (-)
Type: CAZyme
Location: 1934772 - 1937342 (-)
Gene ID: C89_contig_14_1625
Type: CAZyme
Location: 1937364 - 1939436 (-)
Type: CAZyme
Location: 1937364 - 1939436 (-)
Gene ID: C89_contig_14_1626
Type: sulfatase
Location: 1939433 - 1940095 (-)
Type: sulfatase
Location: 1939433 - 1940095 (-)
Gene ID: C89_contig_14_1627
Type: CAZyme
Location: 1940116 - 1942128 (-)
Type: CAZyme
Location: 1940116 - 1942128 (-)
Gene ID: C89_contig_14_1628
Type: CAZyme
Location: 1942160 - 1943794 (-)
Type: CAZyme
Location: 1942160 - 1943794 (-)
Gene ID: C89_contig_14_1629
Type:
Location: 1943847 - 1944035 (-)
Type:
Location: 1943847 - 1944035 (-)
Gene ID: C89_contig_14_1630
Type: pfam
Location: 1944078 - 1946093 (-)
Type: pfam
Location: 1944078 - 1946093 (-)
Gene ID: C89_contig_14_1631
Type: TC
Location: 1946105 - 1949275 (-)
Type: TC
Location: 1946105 - 1949275 (-)
Gene ID: C89_contig_14_1632
Type: TC
Location: 1950037 - 1953360 (+)
Type: TC
Location: 1950037 - 1953360 (+)
Gene ID: C89_contig_14_1633
Type: TC
Location: 1953378 - 1954940 (+)
Type: TC
Location: 1953378 - 1954940 (+)
Gene ID: C89_contig_14_1634
Type: TC
Location: 1955055 - 1956626 (-)
Type: TC
Location: 1955055 - 1956626 (-)
Gene ID: C89_contig_14_1635
Type: TC
Location: 1956654 - 1959923 (-)
Type: TC
Location: 1956654 - 1959923 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides fragilis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.