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Cluster: C89.bin_3_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C89_contig_14 C89_contig_14_117 147070 147804 + GT2
TC C89_contig_14 C89_contig_14_118 147809 148456 + 2.A.123.4.1
CAZyme C89_contig_14 C89_contig_14_119 148446 149999 + GT83
pfam C89_contig_14 C89_contig_14_120 150013 151023 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
NULL(UNKNOWN) C89_contig_14 C89_contig_14_121 151577 151741 - NULL(UNKNOWN)
[View Structural Homologs]
TC C89_contig_14 C89_contig_14_122 151896 155075 + 1.B.14.6.1
TC C89_contig_14 C89_contig_14_123 155088 156707 + 8.A.46.1.3
Gene ID: C89_contig_14_117
Type: CAZyme
Location: 147070 - 147804 (+)
Gene ID: C89_contig_14_118
Type: TC
Location: 147809 - 148456 (+)
Gene ID: C89_contig_14_119
Type: CAZyme
Location: 148446 - 149999 (+)
Gene ID: C89_contig_14_120
Type: pfam
Location: 150013 - 151023 (+)
Gene ID: C89_contig_14_121
Type:
Location: 151577 - 151741 (-)
Gene ID: C89_contig_14_122
Type: TC
Location: 151896 - 155075 (+)
Gene ID: C89_contig_14_123
Type: TC
Location: 155088 - 156707 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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