Cluster: C89.bin_3_CGC30
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate:
- Genome ID: C89.bin_3
- CGC Family ID: CGCFAM_00152
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C89_contig_14 | C89_contig_14_1600 | 1896157 | 1897608 | - | GH125 |
| CAZyme | C89_contig_14 | C89_contig_14_1601 | 1897621 | 1899225 | - | GH63 |
| pfam | C89_contig_14 | C89_contig_14_1602 | 1899244 | 1900386 | - | Alk_phosphatase | Metalloenzyme |
| pfam | C89_contig_14 | C89_contig_14_1603 | 1900433 | 1901296 | - | Exo_endo_phos |
| CAZyme | C89_contig_14 | C89_contig_14_1604 | 1901313 | 1904243 | - | GH92 |
| TC | C89_contig_14 | C89_contig_14_1605 | 1904266 | 1905897 | - | 8.A.46.1.3 |
| TC | C89_contig_14 | C89_contig_14_1606 | 1905909 | 1909055 | - | 1.B.14.6.1 |
| pfam | C89_contig_14 | C89_contig_14_1607 | 1909204 | 1910061 | - | ROK | ROK |
| pfam | C89_contig_14 | C89_contig_14_1608 | 1910226 | 1911263 | - | PI-PLC-X |
| TC | C89_contig_14 | C89_contig_14_1609 | 1911484 | 1912353 | - | 9.B.2.1.6 |
Gene ID: C89_contig_14_1600
Type: CAZyme
Location: 1896157 - 1897608 (-)
Type: CAZyme
Location: 1896157 - 1897608 (-)
Gene ID: C89_contig_14_1601
Type: CAZyme
Location: 1897621 - 1899225 (-)
Type: CAZyme
Location: 1897621 - 1899225 (-)
Gene ID: C89_contig_14_1602
Type: pfam
Location: 1899244 - 1900386 (-)
Type: pfam
Location: 1899244 - 1900386 (-)
Gene ID: C89_contig_14_1603
Type: pfam
Location: 1900433 - 1901296 (-)
Type: pfam
Location: 1900433 - 1901296 (-)
Gene ID: C89_contig_14_1604
Type: CAZyme
Location: 1901313 - 1904243 (-)
Type: CAZyme
Location: 1901313 - 1904243 (-)
Gene ID: C89_contig_14_1605
Type: TC
Location: 1904266 - 1905897 (-)
Type: TC
Location: 1904266 - 1905897 (-)
Gene ID: C89_contig_14_1606
Type: TC
Location: 1905909 - 1909055 (-)
Type: TC
Location: 1905909 - 1909055 (-)
Gene ID: C89_contig_14_1607
Type: pfam
Location: 1909204 - 1910061 (-)
Type: pfam
Location: 1909204 - 1910061 (-)
Gene ID: C89_contig_14_1608
Type: pfam
Location: 1910226 - 1911263 (-)
Type: pfam
Location: 1910226 - 1911263 (-)
Gene ID: C89_contig_14_1609
Type: TC
Location: 1911484 - 1912353 (-)
Type: TC
Location: 1911484 - 1912353 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides fragilis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C89_contig_14_1603 | vegan > omnivore | 1.10652 | 0.00500 |