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Cluster: C89.bin_3_CGC80

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C89_contig_13 C89_contig_13_258 319418 320575 + GT4
pfam C89_contig_13 C89_contig_13_259 320572 321642 + EpsG
CAZyme C89_contig_13 C89_contig_13_260 321650 322468 + GT2
NULL(UNKNOWN) C89_contig_13 C89_contig_13_261 322502 322705 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme C89_contig_13 C89_contig_13_262 322935 323699 + GT2
pfam C89_contig_13 C89_contig_13_263 323696 324658 + 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
TC C89_contig_13 C89_contig_13_264 324662 325612 + 9.B.146.1.7
Gene ID: C89_contig_13_258
Type: CAZyme
Location: 319418 - 320575 (+)
Gene ID: C89_contig_13_259
Type: pfam
Location: 320572 - 321642 (+)
Gene ID: C89_contig_13_260
Type: CAZyme
Location: 321650 - 322468 (+)
Gene ID: C89_contig_13_261
Type:
Location: 322502 - 322705 (+)
Gene ID: C89_contig_13_262
Type: CAZyme
Location: 322935 - 323699 (+)
Gene ID: C89_contig_13_263
Type: pfam
Location: 323696 - 324658 (+)
Gene ID: C89_contig_13_264
Type: TC
Location: 324662 - 325612 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C89_contig_13_264 vegan > omnivore 1.53379 0.00500

🧭 Explore Read Mapping of CGC

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