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Cluster: C89.bin_3_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C89_contig_14 C89_contig_14_238 309994 313029 - 2.A.6.2.37
pfam C89_contig_14 C89_contig_14_239 313172 314224 - HlyD_3 | Biotin_lipoyl_2 | HlyD_D23
CAZyme C89_contig_14 C89_contig_14_240 314576 316891 - GH65
TC C89_contig_14 C89_contig_14_241 317244 318560 - 2.A.2.6.2
TF C89_contig_14 C89_contig_14_242 318581 319591 - LacI
TC C89_contig_14 C89_contig_14_243 319907 322915 + 1.B.14.6.1
TC C89_contig_14 C89_contig_14_244 322926 324545 + 8.A.46.1.1
pfam C89_contig_14 C89_contig_14_245 324581 326179 + SusE | SusF_SusE
CAZyme C89_contig_14 C89_contig_14_246 326284 329145 + GH13_10
Gene ID: C89_contig_14_238
Type: TC
Location: 309994 - 313029 (-)
Gene ID: C89_contig_14_239
Type: pfam
Location: 313172 - 314224 (-)
Gene ID: C89_contig_14_240
Type: CAZyme
Location: 314576 - 316891 (-)
Gene ID: C89_contig_14_241
Type: TC
Location: 317244 - 318560 (-)
Gene ID: C89_contig_14_242
Type: TF
Location: 318581 - 319591 (-)
Gene ID: C89_contig_14_243
Type: TC
Location: 319907 - 322915 (+)
Gene ID: C89_contig_14_244
Type: TC
Location: 322926 - 324545 (+)
Gene ID: C89_contig_14_245
Type: pfam
Location: 324581 - 326179 (+)
Gene ID: C89_contig_14_246
Type: CAZyme
Location: 326284 - 329145 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C89_contig_14_242 vegan > omnivore 1.92623 0.00500

🧭 Explore Read Mapping of CGC

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