Cluster: C89.bin_3_CGC50
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 9
- Substrate:
- Genome ID: C89.bin_3
- CGC Family ID: CGCFAM_03045
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C89_contig_31 | C89_contig_31_330 | 396193 | 397269 | - | GH43_26 |
| CAZyme | C89_contig_31 | C89_contig_31_331 | 397351 | 399849 | - | GH3 |
| CAZyme | C89_contig_31 | C89_contig_31_332 | 399992 | 401158 | - | GH76 |
| CAZyme | C89_contig_31 | C89_contig_31_333 | 401374 | 403134 | - | GH2 |
| CAZyme | C89_contig_31 | C89_contig_31_334 | 403275 | 405311 | - | GH127 |
| CAZyme | C89_contig_31 | C89_contig_31_335 | 405350 | 407413 | - | GH127 |
| CAZyme | C89_contig_31 | C89_contig_31_336 | 408034 | 408786 | + | GH43_26 |
| CAZyme | C89_contig_31 | C89_contig_31_337 | 408889 | 410703 | + | GH2 |
| sulfatase | C89_contig_31 | C89_contig_31_338 | 410799 | 413309 | + | S1_4 |
| NULL(UNKNOWN) | C89_contig_31 | C89_contig_31_339 | 413562 | 413843 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C89_contig_31 | C89_contig_31_340 | 413863 | 417480 | - | GH38 |
| TC | C89_contig_31 | C89_contig_31_341 | 417824 | 421027 | + | 1.B.14.6.1 |
Gene ID: C89_contig_31_330
Type: CAZyme
Location: 396193 - 397269 (-)
Type: CAZyme
Location: 396193 - 397269 (-)
Gene ID: C89_contig_31_331
Type: CAZyme
Location: 397351 - 399849 (-)
Type: CAZyme
Location: 397351 - 399849 (-)
Gene ID: C89_contig_31_332
Type: CAZyme
Location: 399992 - 401158 (-)
Type: CAZyme
Location: 399992 - 401158 (-)
Gene ID: C89_contig_31_333
Type: CAZyme
Location: 401374 - 403134 (-)
Type: CAZyme
Location: 401374 - 403134 (-)
Gene ID: C89_contig_31_334
Type: CAZyme
Location: 403275 - 405311 (-)
Type: CAZyme
Location: 403275 - 405311 (-)
Gene ID: C89_contig_31_335
Type: CAZyme
Location: 405350 - 407413 (-)
Type: CAZyme
Location: 405350 - 407413 (-)
Gene ID: C89_contig_31_336
Type: CAZyme
Location: 408034 - 408786 (+)
Type: CAZyme
Location: 408034 - 408786 (+)
Gene ID: C89_contig_31_337
Type: CAZyme
Location: 408889 - 410703 (+)
Type: CAZyme
Location: 408889 - 410703 (+)
Gene ID: C89_contig_31_338
Type: sulfatase
Location: 410799 - 413309 (+)
Type: sulfatase
Location: 410799 - 413309 (+)
Gene ID: C89_contig_31_339
Type:
Location: 413562 - 413843 (-)
Type:
Location: 413562 - 413843 (-)
Gene ID: C89_contig_31_340
Type: CAZyme
Location: 413863 - 417480 (-)
Type: CAZyme
Location: 413863 - 417480 (-)
Gene ID: C89_contig_31_341
Type: TC
Location: 417824 - 421027 (+)
Type: TC
Location: 417824 - 421027 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides fragilis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.