Cluster: C89.bin_3_CGC43
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: C89.bin_3
- CGC Family ID: CGCFAM_02366
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C89_contig_31 | C89_contig_31_13 | 20733 | 22379 | - | GH32 |
| TC | C89_contig_31 | C89_contig_31_14 | 22609 | 25371 | + | 1.B.14.12.1 |
| pfam | C89_contig_31 | C89_contig_31_15 | 25560 | 26492 | + | Metallophos |
| NULL(UNKNOWN) | C89_contig_31 | C89_contig_31_16 | 26509 | 26607 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C89_contig_31 | C89_contig_31_17 | 26564 | 28372 | - | 1.A.23.1.4 |
| TC | C89_contig_31 | C89_contig_31_18 | 28499 | 29455 | + | 2.A.19.5.2 |
Gene ID: C89_contig_31_13
Type: CAZyme
Location: 20733 - 22379 (-)
Type: CAZyme
Location: 20733 - 22379 (-)
Gene ID: C89_contig_31_14
Type: TC
Location: 22609 - 25371 (+)
Type: TC
Location: 22609 - 25371 (+)
Gene ID: C89_contig_31_15
Type: pfam
Location: 25560 - 26492 (+)
Type: pfam
Location: 25560 - 26492 (+)
Gene ID: C89_contig_31_16
Type:
Location: 26509 - 26607 (+)
Type:
Location: 26509 - 26607 (+)
Gene ID: C89_contig_31_17
Type: TC
Location: 26564 - 28372 (-)
Type: TC
Location: 26564 - 28372 (-)
Gene ID: C89_contig_31_18
Type: TC
Location: 28499 - 29455 (+)
Type: TC
Location: 28499 - 29455 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides fragilis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C89_contig_31_17 | vegan > omnivore | 1.02351 | 0.00500 |