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Cluster: C89.bin_3_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C89_contig_14 C89_contig_14_12 10344 11012 - 9.B.20.1.4
pfam C89_contig_14 C89_contig_14_13 11237 11608 + DUF2809
pfam C89_contig_14 C89_contig_14_14 11727 17600 + DUF3320 | AAA_11 | AAA_11 | AAA_12 | DUF4011 | AAA_19 | MTES_1575
TC C89_contig_14 C89_contig_14_15 17590 18489 - 1.A.1.24.3
CAZyme C89_contig_14 C89_contig_14_16 18534 19511 - GH23
NULL(UNKNOWN) C89_contig_14 C89_contig_14_17 19729 20034 + NULL(UNKNOWN)
[View Structural Homologs]
TC C89_contig_14 C89_contig_14_18 20227 23985 + 2.A.6.1.8
pfam C89_contig_14 C89_contig_14_19 24165 25670 + OEP | OEP
TC C89_contig_14 C89_contig_14_20 25702 27348 + 2.A.6.1.8
Gene ID: C89_contig_14_12
Type: TC
Location: 10344 - 11012 (-)
Gene ID: C89_contig_14_13
Type: pfam
Location: 11237 - 11608 (+)
Gene ID: C89_contig_14_14
Type: pfam
Location: 11727 - 17600 (+)
Gene ID: C89_contig_14_15
Type: TC
Location: 17590 - 18489 (-)
Gene ID: C89_contig_14_16
Type: CAZyme
Location: 18534 - 19511 (-)
Gene ID: C89_contig_14_17
Type:
Location: 19729 - 20034 (+)
Gene ID: C89_contig_14_18
Type: TC
Location: 20227 - 23985 (+)
Gene ID: C89_contig_14_19
Type: pfam
Location: 24165 - 25670 (+)
Gene ID: C89_contig_14_20
Type: TC
Location: 25702 - 27348 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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