Genome Details
Selected Rep_genome_ID: A129.bin_11
Total Genomes Found: 6
Total Genomes Found: 6
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_I
Species
Eubacterium_I ramulus_A
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| A129.bin_11 | 3,612,731 | 98.85% | 1.59% | China(Inner Mongolia) | Asia | IMGG |
| AG511_bin.27 | 2,983,086 | 95.98% | 1.63% | NA | Africa | H3AfricaPhase2 |
| CGMR078035 | 3,014,337 | 98.47% | 2.01% | China | Asia | CGMR |
| SPMP23_bin.34 | 3,354,823 | 92.5% | 1.63% | Singapore | Asia | SPMP |
| SPMP80_bin.32 | 3,267,414 | 96.84% | 2.01% | Singapore | Asia | SPMP |
| SPMP84_bin.33 | 2,845,935 | 91.57% | 1.54% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| A129.bin_11_CGC23 | CGCFAM_00032 | Yes | 3 | 2 | |
| A129.bin_11_CGC18 | CGCFAM_00067 | Yes | 7 | 2 | galactan |
| A129.bin_11_CGC21 | CGCFAM_00179 | Yes | 3 | 1 | |
| A129.bin_11_CGC2 | CGCFAM_00269 | Yes | 16 | 2 | |
| A129.bin_11_CGC25 | CGCFAM_00318 | Yes | 6 | 1 | |
| A129.bin_11_CGC17 | CGCFAM_00411 | Yes | 6 | 1 | |
| A129.bin_11_CGC5 | CGCFAM_00596 | Yes | 5 | 1 | |
| A129.bin_11_CGC3 | CGCFAM_00660 | Yes | 3 | 1 | |
| A129.bin_11_CGC19 | CGCFAM_00737 | Yes | 3 | 1 | |
| A129.bin_11_CGC9 | CGCFAM_00844 | Yes | 4 | 1 | |
| A129.bin_11_CGC15 | CGCFAM_01099 | Yes | 5 | 2 | |
| A129.bin_11_CGC10 | CGCFAM_01824 | Yes | 3 | 1 | xylan |
| A129.bin_11_CGC24 | CGCFAM_02345 | Yes | 10 | 1 | |
| A129.bin_11_CGC4 | CGCFAM_02346 | Yes | 8 | 1 | |
| A129.bin_11_CGC14 | CGCFAM_03016 | Yes | 4 | 1 | |
| A129.bin_11_CGC1 | CGCFAM_04276 | Yes | 4 | 2 | |
| A129.bin_11_CGC12 | CGCFAM_04278 | Yes | 8 | 4 | |
| A129.bin_11_CGC7 | CGCFAM_04282 | Yes | 6 | 1 | |
| A129.bin_11_CGC11 | CGCFAM_06589 | Yes | 11 | 1 | |
| A129.bin_11_CGC20 | CGCFAM_06591 | Yes | 4 | 1 | |
| A129.bin_11_CGC22 | CGCFAM_06592 | Yes | 3 | 1 | |
| A129.bin_11_CGC6 | CGCFAM_06597 | Yes | 4 | 1 |
Top CAZyme Families