Cluster: A129.bin_11_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: A129.bin_11
- CGC Family ID: CGCFAM_01099
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A129_contig_63 | A129_contig_63_728 | 815359 | 816708 | + | 3.A.1.1.4 |
| TC | A129_contig_63 | A129_contig_63_729 | 816803 | 817696 | + | 3.A.1.1.4 |
| TC | A129_contig_63 | A129_contig_63_730 | 817689 | 818519 | + | 3.A.1.1.4 |
| CAZyme | A129_contig_63 | A129_contig_63_731 | 818674 | 820680 | + | GH42 |
| CAZyme | A129_contig_63 | A129_contig_63_732 | 820903 | 822885 | + | GH136 |
Gene ID: A129_contig_63_728
Type: TC
Location: 815359 - 816708 (+)
Type: TC
Location: 815359 - 816708 (+)
Gene ID: A129_contig_63_729
Type: TC
Location: 816803 - 817696 (+)
Type: TC
Location: 816803 - 817696 (+)
Gene ID: A129_contig_63_730
Type: TC
Location: 817689 - 818519 (+)
Type: TC
Location: 817689 - 818519 (+)
Gene ID: A129_contig_63_731
Type: CAZyme
Location: 818674 - 820680 (+)
Type: CAZyme
Location: 818674 - 820680 (+)
Gene ID: A129_contig_63_732
Type: CAZyme
Location: 820903 - 822885 (+)
Type: CAZyme
Location: 820903 - 822885 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_I
Species
Eubacterium_I ramulus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A129_contig_63_729 | vegan > omnivore | 2.35214 | 0.01382 |
| A129_contig_63_730 | vegan > omnivore | 1.95478 | 0.00396 |