Cluster: A129.bin_11_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A129.bin_11
- CGC Family ID: CGCFAM_03016
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A129_contig_63 | A129_contig_63_567 | 612518 | 613417 | - | 3.A.1.126.1 |
| TF | A129_contig_63 | A129_contig_63_568 | 613414 | 613788 | - | GntR |
| NULL(UNKNOWN) | A129_contig_63 | A129_contig_63_569 | 614338 | 614535 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A129_contig_63 | A129_contig_63_570 | 615184 | 616716 | + | GH77 |
Gene ID: A129_contig_63_567
Type: TC
Location: 612518 - 613417 (-)
Type: TC
Location: 612518 - 613417 (-)
Gene ID: A129_contig_63_568
Type: TF
Location: 613414 - 613788 (-)
Type: TF
Location: 613414 - 613788 (-)
Gene ID: A129_contig_63_569
Type:
Location: 614338 - 614535 (-)
Type:
Location: 614338 - 614535 (-)
Gene ID: A129_contig_63_570
Type: CAZyme
Location: 615184 - 616716 (+)
Type: CAZyme
Location: 615184 - 616716 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_I
Species
Eubacterium_I ramulus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A129_contig_63_568 | vegetarian > omnivore | 2.07601 | 0.00554 |
| A129_contig_63_568 | vegetarian > vegan | 1.97924 | 0.03924 |