Cluster: A129.bin_11_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: A129.bin_11
- CGC Family ID: CGCFAM_04282
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A129_contig_696 | A129_contig_696_52 | 70627 | 72375 | - | 3.A.1.135.5 |
| TC | A129_contig_696 | A129_contig_696_53 | 72660 | 74465 | - | 3.A.1.135.5 |
| CAZyme | A129_contig_696 | A129_contig_696_54 | 74524 | 76002 | - | CE4 |
| STP | A129_contig_696 | A129_contig_696_55 | 76225 | 77568 | - | SBP_bac_1 |
| pfam | A129_contig_696 | A129_contig_696_56 | 78080 | 79399 | - | MFS_1 | MFS_1 |
| TC | A129_contig_696 | A129_contig_696_57 | 79781 | 81745 | + | 9.B.33.1.1 |
Gene ID: A129_contig_696_52
Type: TC
Location: 70627 - 72375 (-)
Type: TC
Location: 70627 - 72375 (-)
Gene ID: A129_contig_696_53
Type: TC
Location: 72660 - 74465 (-)
Type: TC
Location: 72660 - 74465 (-)
Gene ID: A129_contig_696_54
Type: CAZyme
Location: 74524 - 76002 (-)
Type: CAZyme
Location: 74524 - 76002 (-)
Gene ID: A129_contig_696_55
Type: STP
Location: 76225 - 77568 (-)
Type: STP
Location: 76225 - 77568 (-)
Gene ID: A129_contig_696_56
Type: pfam
Location: 78080 - 79399 (-)
Type: pfam
Location: 78080 - 79399 (-)
Gene ID: A129_contig_696_57
Type: TC
Location: 79781 - 81745 (+)
Type: TC
Location: 79781 - 81745 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_I
Species
Eubacterium_I ramulus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A129_contig_696_52 | vegetarian > vegan | 1.04341 | 0.03201 |