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Cluster: A129.bin_11_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A129_contig_63 A129_contig_63_176 184356 185168 + 3.A.1.3.27
TC A129_contig_63 A129_contig_63_177 185373 186101 + 3.A.1.3.20
TC A129_contig_63 A129_contig_63_178 186088 186810 + 3.A.1.3.15
peptidase A129_contig_63 A129_contig_63_179 187123 188259 + M20.UPW
CAZyme A129_contig_63 A129_contig_63_180 188574 190565 + GH20
pfam A129_contig_63 A129_contig_63_181 190771 193380 + YfhO
TC A129_contig_63 A129_contig_63_182 193719 194093 + 1.E.14.1.17
TC A129_contig_63 A129_contig_63_183 194074 194766 + 2.A.122.1.4
NULL(UNKNOWN) A129_contig_63 A129_contig_63_184 195681 196157 + NULL(UNKNOWN)
[View Structural Homologs]
pfam A129_contig_63 A129_contig_63_185 196342 197196 + GDPD
TC A129_contig_63 A129_contig_63_186 197193 198557 + 2.A.66.1.34
Gene ID: A129_contig_63_176
Type: TC
Location: 184356 - 185168 (+)
Gene ID: A129_contig_63_177
Type: TC
Location: 185373 - 186101 (+)
Gene ID: A129_contig_63_178
Type: TC
Location: 186088 - 186810 (+)
Gene ID: A129_contig_63_179
Type: peptidase
Location: 187123 - 188259 (+)
Gene ID: A129_contig_63_180
Type: CAZyme
Location: 188574 - 190565 (+)
Gene ID: A129_contig_63_181
Type: pfam
Location: 190771 - 193380 (+)
Gene ID: A129_contig_63_182
Type: TC
Location: 193719 - 194093 (+)
Gene ID: A129_contig_63_183
Type: TC
Location: 194074 - 194766 (+)
Gene ID: A129_contig_63_184
Type:
Location: 195681 - 196157 (+)
Gene ID: A129_contig_63_185
Type: pfam
Location: 196342 - 197196 (+)
Gene ID: A129_contig_63_186
Type: TC
Location: 197193 - 198557 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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