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Cluster: A129.bin_11_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A129_contig_63 A129_contig_63_1110 1223522 1224169 + 2.A.115.2.14
TF A129_contig_63 A129_contig_63_1111 1224297 1225139 - HTH_AraC | HTH_AraC
TC A129_contig_63 A129_contig_63_1112 1225331 1226641 + 3.A.1.1.28
TC A129_contig_63 A129_contig_63_1113 1226638 1227513 + 3.A.1.1.45
TC A129_contig_63 A129_contig_63_1114 1227513 1228349 + 3.A.1.1.28
CAZyme A129_contig_63 A129_contig_63_1115 1228449 1231247 + GH36
CAZyme A129_contig_63 A129_contig_63_1116 1231237 1232706 + GH13_18
Gene ID: A129_contig_63_1110
Type: TC
Location: 1223522 - 1224169 (+)
Gene ID: A129_contig_63_1111
Type: TF
Location: 1224297 - 1225139 (-)
Gene ID: A129_contig_63_1112
Type: TC
Location: 1225331 - 1226641 (+)
Gene ID: A129_contig_63_1113
Type: TC
Location: 1226638 - 1227513 (+)
Gene ID: A129_contig_63_1114
Type: TC
Location: 1227513 - 1228349 (+)
Gene ID: A129_contig_63_1115
Type: CAZyme
Location: 1228449 - 1231247 (+)
Gene ID: A129_contig_63_1116
Type: CAZyme
Location: 1231237 - 1232706 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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