Cluster: A129.bin_11_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: A129.bin_11
- CGC Family ID: CGCFAM_00411
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A129_contig_63 | A129_contig_63_930 | 1050433 | 1051314 | + | 9.A.40.1.1 |
| peptidase | A129_contig_63 | A129_contig_63_931 | 1051410 | 1052138 | + | M20.UNW |
| CAZyme | A129_contig_63 | A129_contig_63_932 | 1052405 | 1053853 | + | GT5 |
| peptidase | A129_contig_63 | A129_contig_63_933 | 1054088 | 1054762 | + | S14.UPW |
| pfam | A129_contig_63 | A129_contig_63_934 | 1054888 | 1055763 | + | BacA |
| TC | A129_contig_63 | A129_contig_63_935 | 1055794 | 1058529 | + | 3.A.12.1.1 |
Gene ID: A129_contig_63_930
Type: TC
Location: 1050433 - 1051314 (+)
Type: TC
Location: 1050433 - 1051314 (+)
Gene ID: A129_contig_63_931
Type: peptidase
Location: 1051410 - 1052138 (+)
Type: peptidase
Location: 1051410 - 1052138 (+)
Gene ID: A129_contig_63_932
Type: CAZyme
Location: 1052405 - 1053853 (+)
Type: CAZyme
Location: 1052405 - 1053853 (+)
Gene ID: A129_contig_63_933
Type: peptidase
Location: 1054088 - 1054762 (+)
Type: peptidase
Location: 1054088 - 1054762 (+)
Gene ID: A129_contig_63_934
Type: pfam
Location: 1054888 - 1055763 (+)
Type: pfam
Location: 1054888 - 1055763 (+)
Gene ID: A129_contig_63_935
Type: TC
Location: 1055794 - 1058529 (+)
Type: TC
Location: 1055794 - 1058529 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_I
Species
Eubacterium_I ramulus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.