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Cluster: A129.bin_11_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A129_contig_100 A129_contig_100_69 83335 85908 - GH3
STP A129_contig_100 A129_contig_100_70 85997 86635 - Pribosyltran
TC A129_contig_100 A129_contig_100_71 86983 88323 + 2.A.40.1.2
TC A129_contig_100 A129_contig_100_72 88441 89538 - 3.A.1.13.2
TC A129_contig_100 A129_contig_100_73 89535 90536 - 3.A.1.13.2
STP A129_contig_100 A129_contig_100_74 90557 92089 - Peripla_BP_2
pfam A129_contig_100 A129_contig_100_75 92196 93800 - CbiK
TC A129_contig_100 A129_contig_100_76 94374 96152 - 1.C.105.2.8
Gene ID: A129_contig_100_69
Type: CAZyme
Location: 83335 - 85908 (-)
Gene ID: A129_contig_100_70
Type: STP
Location: 85997 - 86635 (-)
Gene ID: A129_contig_100_71
Type: TC
Location: 86983 - 88323 (+)
Gene ID: A129_contig_100_72
Type: TC
Location: 88441 - 89538 (-)
Gene ID: A129_contig_100_73
Type: TC
Location: 89535 - 90536 (-)
Gene ID: A129_contig_100_74
Type: STP
Location: 90557 - 92089 (-)
Gene ID: A129_contig_100_75
Type: pfam
Location: 92196 - 93800 (-)
Gene ID: A129_contig_100_76
Type: TC
Location: 94374 - 96152 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A129_contig_100_70 vegan > omnivore 1.10009 0.03536

🧭 Explore Read Mapping of CGC

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