Cluster: A129.bin_11_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate: xylan
- Genome ID: A129.bin_11
- CGC Family ID: CGCFAM_01824
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A129_contig_63 | A129_contig_63_158 | 158327 | 160093 | + | 8.A.59.2.1 |
| TF | A129_contig_63 | A129_contig_63_159 | 160411 | 161346 | + | HTH_AraC | HTH_AraC |
| CAZyme | A129_contig_63 | A129_contig_63_160 | 161458 | 166590 | + | GH28 |
Gene ID: A129_contig_63_158
Type: TC
Location: 158327 - 160093 (+)
Type: TC
Location: 158327 - 160093 (+)
Gene ID: A129_contig_63_159
Type: TF
Location: 160411 - 161346 (+)
Type: TF
Location: 160411 - 161346 (+)
Gene ID: A129_contig_63_160
Type: CAZyme
Location: 161458 - 166590 (+)
Type: CAZyme
Location: 161458 - 166590 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_I
Species
Eubacterium_I ramulus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A129_contig_63_159 | vegan > omnivore | 1.59267 | 0.03536 |