Cluster: A129.bin_11_CGC25
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: A129.bin_11
- CGC Family ID: CGCFAM_00318
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A129_contig_815_corr_3_np12 | A129_contig_815_corr_3_np12_188 | 214089 | 215186 | - | 3.A.1.11.7 |
| TC | A129_contig_815_corr_3_np12 | A129_contig_815_corr_3_np12_189 | 215519 | 216331 | - | 3.A.1.11.8 |
| TC | A129_contig_815_corr_3_np12 | A129_contig_815_corr_3_np12_190 | 216325 | 217140 | - | 3.A.1.11.8 |
| TC | A129_contig_815_corr_3_np12 | A129_contig_815_corr_3_np12_191 | 217133 | 218206 | - | 3.A.1.11.8 |
| TF | A129_contig_815_corr_3_np12 | A129_contig_815_corr_3_np12_192 | 218463 | 219020 | - | HTH_3 |
| CAZyme | A129_contig_815_corr_3_np12 | A129_contig_815_corr_3_np12_193 | 219598 | 220362 | + | CE4 |
Gene ID: A129_contig_815_corr_3_np12_188
Type: TC
Location: 214089 - 215186 (-)
Type: TC
Location: 214089 - 215186 (-)
Gene ID: A129_contig_815_corr_3_np12_189
Type: TC
Location: 215519 - 216331 (-)
Type: TC
Location: 215519 - 216331 (-)
Gene ID: A129_contig_815_corr_3_np12_190
Type: TC
Location: 216325 - 217140 (-)
Type: TC
Location: 216325 - 217140 (-)
Gene ID: A129_contig_815_corr_3_np12_191
Type: TC
Location: 217133 - 218206 (-)
Type: TC
Location: 217133 - 218206 (-)
Gene ID: A129_contig_815_corr_3_np12_192
Type: TF
Location: 218463 - 219020 (-)
Type: TF
Location: 218463 - 219020 (-)
Gene ID: A129_contig_815_corr_3_np12_193
Type: CAZyme
Location: 219598 - 220362 (+)
Type: CAZyme
Location: 219598 - 220362 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_I
Species
Eubacterium_I ramulus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.