CGCs
Total: 123241 Gene Clusters| Cluster ID ↑ | CGC Family | Total Gene Count | CAZyme Gene Count | Substrate | CAZymes | Continent |
|---|---|---|---|---|---|---|
| VatanenT_2016_SRR4305041_bin.1_CGC64 | CGCFAM_00646 | 10 | 4 | arabinogalactan |
GH43
Arabinan, arabinoxylan, Beta-1, 3-galactan, arabinogalactan, Beta-galactofuranoside, 3-xylan (algae), Xylan, Arabinoxylan
CBM32
Galactose, lactose, lacnac
GH16
Agarose, Arabinogalactan proteins, Beta-1, 3-glucan, 3-glucan (fungi, algae, plant), 3-1, 4-glucan (laminarin, lichenin and cereal d-glucans), Carrageenan, Chitin, Exopolysaccharides (bacteria), Mucin-type o-glycans, Keratan sulfate (host glycan), Hyaluronate (glycosaminoglycan of host glycan), Porphyran (red algal beta-galactose-sulfate), Xyloglucan (plant), Xyloglucan
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC65 | — | 9 | 1 | — |
CBM32
Galactose, lactose, lacnac
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC66 | CGCFAM_08449 | 3 | 2 | — |
GH2
Galactomannan (fungi), Arabinan, Beta-galactoside, Beta-glucoside, Beta-glucuronoside, Beta-mannoside, Chitosan or chitosan oligosaccharides (nonacetylated chitin), N-glycan (plant), Pectin (rhamnogalacturonan ii), Beta-xyloside
PL8
Alginate, Hyaluronan, Glycosaminoglycans(host glycan), Heparin and heparan sulfate(host glycan), Xanthan
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC67 | — | 3 | 2 | — |
GH13
Starch, glycogen, and malto-oligosaccharides, Cyclodextrin (alpha-1, 4 glycosidic glucan from starch degradation), Glycogen, Pullulan (starch degradation by fungi), and alpha-1, 6 glucan, Glucosylglycerate, Maltooligosaccharides, Amylopectin (starch), Cyclomaltodextrins, Maltose, Sucrose, Trehalose
GH97
Alpha-glucose residue, Alpha-galactoside, alpha-fucoside, Starch
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC68 | CGCFAM_02718 | 6 | 2 | — |
GH130
Mannooligosaccharides, Beta-mannan
GH30
Arabinogalactan proteins, Beta-fucosides, Beta-glucan, Beta-1, 6-glucan (fungal and algal cell wall), Glucosylsphingosine, glucosylceramide (host glycans), Xylan
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC69 | CGCFAM_02933 | 6 | 1 | host glycan |
GH30
Arabinogalactan proteins, Beta-fucosides, Beta-glucan, Beta-1, 6-glucan (fungal and algal cell wall), Glucosylsphingosine, glucosylceramide (host glycans), Xylan
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC7 | CGCFAM_00647 | 6 | 3 | — |
GH2
Galactomannan (fungi), Arabinan, Beta-galactoside, Beta-glucoside, Beta-glucuronoside, Beta-mannoside, Chitosan or chitosan oligosaccharides (nonacetylated chitin), N-glycan (plant), Pectin (rhamnogalacturonan ii), Beta-xyloside
CBM32
Galactose, lactose, lacnac
GH105
Pectin, Pectin (rhamnogalacturonan i), Ulvan
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC70 | — | 3 | 1 | — |
GH2
Galactomannan (fungi), Arabinan, Beta-galactoside, Beta-glucoside, Beta-glucuronoside, Beta-mannoside, Chitosan or chitosan oligosaccharides (nonacetylated chitin), N-glycan (plant), Pectin (rhamnogalacturonan ii), Beta-xyloside
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC71 | CGCFAM_00043 | 8 | 2 | alpha-glucan |
GH65
Kojibiose and alpha-1, 2-oligoglucan, Trehalose, kojibiose, Kojibiose, Nigerose, 1, 3-alpha-oligoglucan, Maltose (alpha-1, 4), Glc-alpha-1, 2-gal of collagen (animal), Glucopyranosyl-alpha-1, 3-rhamnose (bacteria lipopolysaccharides or capsule polysaccharides)
GH66
Dextran (alpha-1, 6), Dextran
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC72 | CGCFAM_00001 | 5 | 1 | pectin galactan beta-glucan xylan beta-mannan host glycan |
GH29
Human milk oligosaccharides, mucin, host glycan
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC73 | — | 9 | 5 | — |
GH95
Plant pectic polysaccharide, xylan, Alpha1, 2-l-fucosidase sugar, Alpha-l-fucoside
PL35
GH109
Mucin-type o-glycans
GH31
Alpha-galactoside, Alpha-mannoside, Sulfoquinovoside (plant sulfolipid), Human blood group a, mucin, host glycan, Mannosyl-oligosaccharide, Glycogen and starch, Starch, Sucrose, Xyloglucan (plant)
GH154
Arabinogalactan proteins
GH88
Sulfated glycosaminoglycans
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC74 | — | 4 | 1 | — |
GT19
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC75 | CGCFAM_00363 | 12 | 4 | — |
GH23
Chitin, Peptidoglycan
GH92
Mannosyl-oligosaccharide, Host n-glycan
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC8 | — | 4 | 2 | — |
CBM32
Galactose, lactose, lacnac
|
Europe |
| VatanenT_2016_SRR4305041_bin.1_CGC9 | CGCFAM_00720 | 7 | 4 | host glycan |
CBM32
Galactose, lactose, lacnac
GH110
Blood group b substances, host glycans
GH109
Mucin-type o-glycans
|
Europe |
| VatanenT_2016_SRR4305227_bin.9_CGC1 | CGCFAM_00691 | 5 | 2 | — |
GH94
Acholetin, Laminarin, 1, 2-beta-oligoglucan, Cellobiose, Cellobionic acid, Cellodextrin, 4-o-beta--glucosyl-galactose, Chitin
GH4
Beta-glucoside (sinigrin, cellubiose), Isomaltulose (palatinose, from honey and sugar cane), Galacturonides (polygalacturonan of pectin), Alpha-galactoside (raffinose family of oligosaccharides), Maltose and other small maltooligosaccharides, Sucrose and its isomeric disaccharides, Alpha-glucuronide in glucuronoxylan
|
Asia |
| VatanenT_2016_SRR4305227_bin.9_CGC11 | — | 4 | 1 | — |
GH24
Peptidoglycan
|
Asia |
| VatanenT_2016_SRR4305227_bin.9_CGC12 | CGCFAM_00004 | 8 | 3 | alpha-glucan |
GH3
Arabinan, arabinoxylan, Avenacin, Beta-1, 3-1, 4-glucan (laminarin, lichenin and cereal d-glucans), Beta-glucan, 3-glucan (laminarin, Cellodextrin (beta-1, 3-glucan), Chitin, peptidoglycan, Glycosphingolipid (host glycan), Peptidoglycan, Coniferin (glucoside of coniferyl alcohol), Protodioscin (plant steroidal saponin), Xylan, Xyloglucan (plant)
GT5
CBM48
Glycogen
GH13
Starch, glycogen, and malto-oligosaccharides, Cyclodextrin (alpha-1, 4 glycosidic glucan from starch degradation), Glycogen, Pullulan (starch degradation by fungi), and alpha-1, 6 glucan, Glucosylglycerate, Maltooligosaccharides, Amylopectin (starch), Cyclomaltodextrins, Maltose, Sucrose, Trehalose
|
Asia |
| VatanenT_2016_SRR4305227_bin.9_CGC13 | — | 9 | 2 | — |
GT35
GH13
Starch, glycogen, and malto-oligosaccharides, Cyclodextrin (alpha-1, 4 glycosidic glucan from starch degradation), Glycogen, Pullulan (starch degradation by fungi), and alpha-1, 6 glucan, Glucosylglycerate, Maltooligosaccharides, Amylopectin (starch), Cyclomaltodextrins, Maltose, Sucrose, Trehalose
|
Asia |
| VatanenT_2016_SRR4305227_bin.9_CGC14 | CGCFAM_01474 | 7 | 3 | — |
GH29
Human milk oligosaccharides, mucin, host glycan
GH2
Galactomannan (fungi), Arabinan, Beta-galactoside, Beta-glucoside, Beta-glucuronoside, Beta-mannoside, Chitosan or chitosan oligosaccharides (nonacetylated chitin), N-glycan (plant), Pectin (rhamnogalacturonan ii), Beta-xyloside
GH13
Starch, glycogen, and malto-oligosaccharides, Cyclodextrin (alpha-1, 4 glycosidic glucan from starch degradation), Glycogen, Pullulan (starch degradation by fungi), and alpha-1, 6 glucan, Glucosylglycerate, Maltooligosaccharides, Amylopectin (starch), Cyclomaltodextrins, Maltose, Sucrose, Trehalose
|
Asia |