Cluster: VatanenT_2016_SRR4305041_bin.1_CGC73
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 5
- Substrate:
- Genome ID: VatanenT_2016_SRR4305041_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | VatanenT_2016_SRR4305041_bin.1_k119_6601 | VatanenT_2016_SRR4305041_bin.1_k119_6601_97 | 145325 | 149203 | + | GH31_18 |
| CAZyme | VatanenT_2016_SRR4305041_bin.1_k119_6601 | VatanenT_2016_SRR4305041_bin.1_k119_6601_98 | 149745 | 151004 | - | GH154 |
| CAZyme | VatanenT_2016_SRR4305041_bin.1_k119_6601 | VatanenT_2016_SRR4305041_bin.1_k119_6601_99 | 151019 | 152287 | - | GH88 |
| sulfatase | VatanenT_2016_SRR4305041_bin.1_k119_6601 | VatanenT_2016_SRR4305041_bin.1_k119_6601_100 | 152309 | 154864 | - | S1_8 |
| pfam | VatanenT_2016_SRR4305041_bin.1_k119_6601 | VatanenT_2016_SRR4305041_bin.1_k119_6601_101 | 154901 | 156823 | - | SusD_RagB | SusD-like_3 |
| TC | VatanenT_2016_SRR4305041_bin.1_k119_6601 | VatanenT_2016_SRR4305041_bin.1_k119_6601_102 | 156834 | 160016 | - | 1.B.14.6.1 |
| peptidase | VatanenT_2016_SRR4305041_bin.1_k119_6601 | VatanenT_2016_SRR4305041_bin.1_k119_6601_103 | 160282 | 161811 | + | M98.UPW |
| CAZyme | VatanenT_2016_SRR4305041_bin.1_k119_6601 | VatanenT_2016_SRR4305041_bin.1_k119_6601_104 | 161831 | 165829 | + | GH95 | PL35 |
| CAZyme | VatanenT_2016_SRR4305041_bin.1_k119_6601 | VatanenT_2016_SRR4305041_bin.1_k119_6601_105 | 165857 | 167416 | + | GH109 |
Gene ID: VatanenT_2016_SRR4305041_bin.1_k119_6601_97
Type: CAZyme
Location: 145325 - 149203 (+)
Type: CAZyme
Location: 145325 - 149203 (+)
Gene ID: VatanenT_2016_SRR4305041_bin.1_k119_6601_98
Type: CAZyme
Location: 149745 - 151004 (-)
Type: CAZyme
Location: 149745 - 151004 (-)
Gene ID: VatanenT_2016_SRR4305041_bin.1_k119_6601_99
Type: CAZyme
Location: 151019 - 152287 (-)
Type: CAZyme
Location: 151019 - 152287 (-)
Gene ID: VatanenT_2016_SRR4305041_bin.1_k119_6601_100
Type: sulfatase
Location: 152309 - 154864 (-)
Type: sulfatase
Location: 152309 - 154864 (-)
Gene ID: VatanenT_2016_SRR4305041_bin.1_k119_6601_101
Type: pfam
Location: 154901 - 156823 (-)
Type: pfam
Location: 154901 - 156823 (-)
Gene ID: VatanenT_2016_SRR4305041_bin.1_k119_6601_102
Type: TC
Location: 156834 - 160016 (-)
Type: TC
Location: 156834 - 160016 (-)
Gene ID: VatanenT_2016_SRR4305041_bin.1_k119_6601_103
Type: peptidase
Location: 160282 - 161811 (+)
Type: peptidase
Location: 160282 - 161811 (+)
Gene ID: VatanenT_2016_SRR4305041_bin.1_k119_6601_104
Type: CAZyme
Location: 161831 - 165829 (+)
Type: CAZyme
Location: 161831 - 165829 (+)
Gene ID: VatanenT_2016_SRR4305041_bin.1_k119_6601_105
Type: CAZyme
Location: 165857 - 167416 (+)
Type: CAZyme
Location: 165857 - 167416 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900547205
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.