Cluster: VatanenT_2016_SRR4305227_bin.9_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: VatanenT_2016_SRR4305227_bin.9
- CGC Family ID: CGCFAM_00691
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | VatanenT_2016_SRR4305227_bin.9_k119_449 | VatanenT_2016_SRR4305227_bin.9_k119_449_9 | 9501 | 10832 | + | GH4 |
| STP | VatanenT_2016_SRR4305227_bin.9_k119_449 | VatanenT_2016_SRR4305227_bin.9_k119_449_10 | 10905 | 12197 | + | SBP_bac_1 |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_449 | VatanenT_2016_SRR4305227_bin.9_k119_449_11 | 12271 | 13146 | + | 3.A.1.1.20 |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_449 | VatanenT_2016_SRR4305227_bin.9_k119_449_12 | 13148 | 13981 | + | 3.A.1.1.36 |
| CAZyme | VatanenT_2016_SRR4305227_bin.9_k119_449 | VatanenT_2016_SRR4305227_bin.9_k119_449_13 | 14087 | 16522 | - | GH94 |
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_449_9
Type: CAZyme
Location: 9501 - 10832 (+)
Type: CAZyme
Location: 9501 - 10832 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_449_10
Type: STP
Location: 10905 - 12197 (+)
Type: STP
Location: 10905 - 12197 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_449_11
Type: TC
Location: 12271 - 13146 (+)
Type: TC
Location: 12271 - 13146 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_449_12
Type: TC
Location: 13148 - 13981 (+)
Type: TC
Location: 13148 - 13981 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_449_13
Type: CAZyme
Location: 14087 - 16522 (-)
Type: CAZyme
Location: 14087 - 16522 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caproiciproducens
Species
Caproiciproducens sp900546895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.