Cluster: VatanenT_2016_SRR4305227_bin.9_CGC13
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate:
- Genome ID: VatanenT_2016_SRR4305227_bin.9
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | VatanenT_2016_SRR4305227_bin.9_k119_9219 | VatanenT_2016_SRR4305227_bin.9_k119_9219_17 | 18411 | 20873 | + | GT35 |
| CAZyme | VatanenT_2016_SRR4305227_bin.9_k119_9219 | VatanenT_2016_SRR4305227_bin.9_k119_9219_18 | 20901 | 22754 | + | GH13_39 |
| pfam | VatanenT_2016_SRR4305227_bin.9_k119_9219 | VatanenT_2016_SRR4305227_bin.9_k119_9219_19 | 23172 | 23486 | + | DUF3784 |
| STP | VatanenT_2016_SRR4305227_bin.9_k119_9219 | VatanenT_2016_SRR4305227_bin.9_k119_9219_20 | 23818 | 24438 | + | TetR_N |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_9219 | VatanenT_2016_SRR4305227_bin.9_k119_9219_21 | 24586 | 26337 | + | 3.A.1.21.1 |
| pfam | VatanenT_2016_SRR4305227_bin.9_k119_9219 | VatanenT_2016_SRR4305227_bin.9_k119_9219_22 | 26334 | 26921 | + | ABC_membrane |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_9219 | VatanenT_2016_SRR4305227_bin.9_k119_9219_23 | 26978 | 28081 | + | 3.A.1.106.2 |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_9219 | VatanenT_2016_SRR4305227_bin.9_k119_9219_24 | 28306 | 29310 | - | 3.A.1.2.19 |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_9219 | VatanenT_2016_SRR4305227_bin.9_k119_9219_25 | 29329 | 30834 | - | 3.A.1.2.20 |
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_9219_17
Type: CAZyme
Location: 18411 - 20873 (+)
Type: CAZyme
Location: 18411 - 20873 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_9219_18
Type: CAZyme
Location: 20901 - 22754 (+)
Type: CAZyme
Location: 20901 - 22754 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_9219_19
Type: pfam
Location: 23172 - 23486 (+)
Type: pfam
Location: 23172 - 23486 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_9219_20
Type: STP
Location: 23818 - 24438 (+)
Type: STP
Location: 23818 - 24438 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_9219_21
Type: TC
Location: 24586 - 26337 (+)
Type: TC
Location: 24586 - 26337 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_9219_22
Type: pfam
Location: 26334 - 26921 (+)
Type: pfam
Location: 26334 - 26921 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_9219_23
Type: TC
Location: 26978 - 28081 (+)
Type: TC
Location: 26978 - 28081 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_9219_24
Type: TC
Location: 28306 - 29310 (-)
Type: TC
Location: 28306 - 29310 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_9219_25
Type: TC
Location: 29329 - 30834 (-)
Type: TC
Location: 29329 - 30834 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caproiciproducens
Species
Caproiciproducens sp900546895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.