Cluster: VatanenT_2016_SRR4305227_bin.9_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: VatanenT_2016_SRR4305227_bin.9
- CGC Family ID: CGCFAM_01474
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | VatanenT_2016_SRR4305227_bin.9_k119_9814 | VatanenT_2016_SRR4305227_bin.9_k119_9814_1 | 913 | 2358 | - | GH29 |
| CAZyme | VatanenT_2016_SRR4305227_bin.9_k119_9814 | VatanenT_2016_SRR4305227_bin.9_k119_9814_2 | 2355 | 5375 | - | GH2 |
| NULL(UNKNOWN) | VatanenT_2016_SRR4305227_bin.9_k119_9814 | VatanenT_2016_SRR4305227_bin.9_k119_9814_3 | 5676 | 6977 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_9814 | VatanenT_2016_SRR4305227_bin.9_k119_9814_4 | 7182 | 8057 | + | 3.A.1.1.45 |
| TC | VatanenT_2016_SRR4305227_bin.9_k119_9814 | VatanenT_2016_SRR4305227_bin.9_k119_9814_5 | 8057 | 8881 | + | 3.A.1.1.45 |
| TF | VatanenT_2016_SRR4305227_bin.9_k119_9814 | VatanenT_2016_SRR4305227_bin.9_k119_9814_6 | 8901 | 9881 | + | LacI |
| CAZyme | VatanenT_2016_SRR4305227_bin.9_k119_9814 | VatanenT_2016_SRR4305227_bin.9_k119_9814_7 | 10006 | 11454 | + | GH13_18 |
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_9814_1
Type: CAZyme
Location: 913 - 2358 (-)
Type: CAZyme
Location: 913 - 2358 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_9814_2
Type: CAZyme
Location: 2355 - 5375 (-)
Type: CAZyme
Location: 2355 - 5375 (-)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_9814_3
Type:
Location: 5676 - 6977 (+)
Type:
Location: 5676 - 6977 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_9814_4
Type: TC
Location: 7182 - 8057 (+)
Type: TC
Location: 7182 - 8057 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_9814_5
Type: TC
Location: 8057 - 8881 (+)
Type: TC
Location: 8057 - 8881 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_9814_6
Type: TF
Location: 8901 - 9881 (+)
Type: TF
Location: 8901 - 9881 (+)
Gene ID: VatanenT_2016_SRR4305227_bin.9_k119_9814_7
Type: CAZyme
Location: 10006 - 11454 (+)
Type: CAZyme
Location: 10006 - 11454 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caproiciproducens
Species
Caproiciproducens sp900546895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.