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PROTEIN: VatanenT_2016_SRR4305227_bin.9_k119_9814_3

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Protein File & Metadata
Download PDB File
Source:
VatanenT_2016_SRR4305227_bin.9_k119_9814_3.pdb
Genome ID:
VatanenT_2016_SRR4305227_bin.9
Protein ID:
VatanenT_2016_SRR4305227_bin.9_k119_9814_3

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKKVIAFLLA   AAIAVSATAC   SGEDKSKGES   QGSNGARTQI   TFLGTIKDEI   SEDFKKELAA 60
YNASQSKYEI   VNIPLDNGMQ   KLTTLYAGGN   APTLFTAVQE   AATYKNKLYD   FSKFPLIKQA 120
RAGTTDLMTT   EDGKIYGLPV   CEEAFGILYN   KNILDKAVGG   TFDPSTINTQ   DKLKELLEKI 180
AATGVDPTRV   SGVDWSLGSH   MTNLMFAPRS   PSIKTNLQFL   SDLKASKANL   VNDKLYNGWL 240
DTLDLLLQYN   TSKKSPLGAT   YDDDTLAFAQ   GKNALWFQGD   WAMPTLNQDN   MSGEVGIMPY 300
PISNNPSDYG   NSQISVGPSQ   FFCLDISQST   KEQQEGALDF   LNWFFTSKTG   QDYYVNKYGF 360
LSPYKDLTAA   PDDYLSKAIS   KYMDEEKTLN   WMNLYYPGDG   VSSLGAIMQK   YVSGTANREA 420
LAKDIQNYWA   SKQ 433
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q8DNH8-F1-model_v4 12 433 16 416 0.7949 0.8597
AF-Q8DNU8-F1-model_v4 12 433 11 437 0.7466 0.7942
AF-A0A133CSA1-F1-model_v4 35 433 26 427 0.7444 0.8192
AF-A0A132ZDH4-F1-model_v4 24 431 15 427 0.7393 0.7965
AF-P76042-F1-model_v4 35 433 26 428 0.7316 0.8059
AF-P71894-F1-model_v4 21 433 21 439 0.7259 0.7841
AF-P71619-F1-model_v4 36 433 35 425 0.7251 0.8196
AF-A0A133CKQ7-F1-model_v4 16 433 21 416 0.7245 0.7965
AF-A0A133CPC5-F1-model_v4 32 433 29 422 0.7222 0.8021
AF-K0F2E6-F1-model_v4 36 433 42 433 0.7181 0.8149
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K8EJG7-F1-model_v4 CBM50 , CE4 33 433 31 412 0.6893 0.7825
AF-K8E205-F1-model_v4 GH32 23 416 18 344 0.6327 0.7559
AF-A0A1Q2TKJ3-F1-model_v4 GH49 1 433 46 795 0.6269 0.8173
A0A9Q8PNJ5 GH4 1 433 104 864 0.5917 0.7935
AF-A0A7U1BNH7-F1-model_v4 GH10 25 433 19 418 0.5814 0.7961
UJP10085.1 GH154 10 416 495 1168 0.4078 0.6635
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
K8EJG7 CBM50 , CE4 33 433 31 412 0.6893 0.7825
K8E205 GH32 23 416 18 344 0.6327 0.7559
A0A1Q2TKJ3 GH49 1 433 46 795 0.6269 0.8173
A0A0M1Q963 GH43_11 36 433 44 492 0.625 0.7453
A0A9Q8PNJ5 GH4 1 433 104 864 0.5917 0.7935
A0A7U1BNH7 GH10 25 433 19 418 0.5814 0.7961
UJP10085.1 GH154 10 416 495 1168 0.4078 0.6635
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
2heu-assembly3.cif.gz_C 35 433 5 390 0.8273 0.894
3i3v-assembly1.cif.gz_C 35 433 3 394 0.7985 0.8585
7eho-assembly2.cif.gz_B 38 433 1 400 0.79 0.8488
3oo8-assembly1.cif.gz_A 36 433 1 386 0.7754 0.8431
3oo7-assembly1.cif.gz_A 37 433 1 384 0.7748 0.8445
3uor-assembly2.cif.gz_B 38 433 1 385 0.7726 0.8443
3quf-assembly1.cif.gz_A 36 432 2 385 0.7692 0.8362
4zze-assembly1.cif.gz_A 36 433 1 376 0.7682 0.8423
4r6h-assembly1.cif.gz_A 31 433 2 390 0.7668 0.8327
6dtr-assembly1.cif.gz_A 37 433 1 392 0.7663 0.8247
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q00749-F1-model_v4 18 433 10 417 0.8085 0.861
AF-P29822-F1-model_v4 27 433 15 422 0.7406 0.7981
AF-Q55471-F1-model_v4 19 433 7 421 0.74 0.7814
AF-P94528-F1-model_v4 20 433 15 431 0.7387 0.7926
AF-O31518-F1-model_v4 35 433 30 424 0.7338 0.8148
AF-P76042-F1-model_v4 35 433 26 428 0.7316 0.8059
AF-Q8FVS7-F1-model_v4 29 433 17 410 0.7315 0.8029
AF-Q2YKZ9-F1-model_v4 27 433 15 410 0.7291 0.797
AF-Q9K491-F1-model_v4 33 433 35 422 0.7291 0.8206
AF-O34335-F1-model_v4 33 433 27 415 0.7291 0.8206
Download Full SwissProt Results