CGCs
Total: 123241 Gene Clusters| Cluster ID ↑ | CGC Family | Total Gene Count | CAZyme Gene Count | Substrate | CAZymes | Continent |
|---|---|---|---|---|---|---|
| ShaoY_2019_ERR3405641_bin.1_CGC19 | CGCFAM_00598 | 16 | 7 | — |
GT2
GT4
GT51
GH25
Peptidoglycan
GT113
|
Europe |
| ShaoY_2019_ERR3405641_bin.1_CGC20 | — | 3 | 1 | — |
GH36
Alpha-galactoside (galactose oligosaccharides, galactomannans and galactolipid), Acetylgalactosamine (human blood group a and b, mucin glycoproteins), Raffinose/stachyose oligosaccharides (plant seeds), Raffinose oligosaccharides
|
Europe |
| ShaoY_2019_ERR3405641_bin.1_CGC21 | — | 4 | 1 | — |
GH13
Starch, glycogen, and malto-oligosaccharides, Cyclodextrin (alpha-1, 4 glycosidic glucan from starch degradation), Glycogen, Pullulan (starch degradation by fungi), and alpha-1, 6 glucan, Glucosylglycerate, Maltooligosaccharides, Amylopectin (starch), Cyclomaltodextrins, Maltose, Sucrose, Trehalose
|
Europe |
| ShaoY_2019_ERR3405641_bin.1_CGC24 | — | 4 | 2 | — |
GH31
Alpha-galactoside, Alpha-mannoside, Sulfoquinovoside (plant sulfolipid), Human blood group a, mucin, host glycan, Mannosyl-oligosaccharide, Glycogen and starch, Starch, Sucrose, Xyloglucan (plant)
GH13
Starch, glycogen, and malto-oligosaccharides, Cyclodextrin (alpha-1, 4 glycosidic glucan from starch degradation), Glycogen, Pullulan (starch degradation by fungi), and alpha-1, 6 glucan, Glucosylglycerate, Maltooligosaccharides, Amylopectin (starch), Cyclomaltodextrins, Maltose, Sucrose, Trehalose
|
Europe |
| ShaoY_2019_ERR3405641_bin.1_CGC3 | CGCFAM_00311 | 11 | 4 | host glycan |
GH20
Capsular polysaccharide (bacteria), Mucin, N-glycan (host glycan, human milk oligosaccharides, chitin), Lacto-n-tetraose (human milk oligosaccharides)
GH38
Mannosyl-oligosaccharide
GH125
Alpha-mannan, plant n-glycan
GH92
Mannosyl-oligosaccharide, Host n-glycan
|
Europe |
| ShaoY_2019_ERR3405641_bin.1_CGC4 | — | 5 | 1 | — |
CE1
Hydroxycinnamic acids(phenolic acids), Trehalose, Acyl-coa, Palmitoyl-coa and other long-chain acyl-coas(ester), Xylan, Feruloyl-polysaccharide(esterified sugar)
|
Europe |
| ShaoY_2019_ERR3405641_bin.1_CGC6 | — | 4 | 1 | — |
GH13
Starch, glycogen, and malto-oligosaccharides, Cyclodextrin (alpha-1, 4 glycosidic glucan from starch degradation), Glycogen, Pullulan (starch degradation by fungi), and alpha-1, 6 glucan, Glucosylglycerate, Maltooligosaccharides, Amylopectin (starch), Cyclomaltodextrins, Maltose, Sucrose, Trehalose
|
Europe |
| ShaoY_2019_ERR3405641_bin.1_CGC8 | CGCFAM_00003 | 11 | 6 | — |
GT2
GT4
CE4
Chitooligosaccharides, Chitin, Peptidoglycan, Acetylxylan
|
Europe |
| ShaoY_2019_ERR3405641_bin.1_CGC9 | — | 4 | 2 | — |
GH8
Beta-glucan (laminarin, lichenin and cereal d-glucans), Beta-glucan (lichenin and cereal beta-glucan), Cellulose, Chitosan, Xylan
GT2
|
Europe |
| ShaoY_2019_ERR3405726_bin.1_CGC1 | — | 5 | 1 | — |
CE1
Hydroxycinnamic acids(phenolic acids), Trehalose, Acyl-coa, Palmitoyl-coa and other long-chain acyl-coas(ester), Xylan, Feruloyl-polysaccharide(esterified sugar)
|
Europe |
| ShaoY_2019_ERR3405726_bin.1_CGC11 | — | 5 | 2 | — |
GT5
CBM48
Glycogen
GH13
Starch, glycogen, and malto-oligosaccharides, Cyclodextrin (alpha-1, 4 glycosidic glucan from starch degradation), Glycogen, Pullulan (starch degradation by fungi), and alpha-1, 6 glucan, Glucosylglycerate, Maltooligosaccharides, Amylopectin (starch), Cyclomaltodextrins, Maltose, Sucrose, Trehalose
|
Europe |
| ShaoY_2019_ERR3405726_bin.1_CGC12 | CGCFAM_01048 | 5 | 1 | — |
CE9
Host glycan
|
Europe |
| ShaoY_2019_ERR3405726_bin.1_CGC13 | — | 16 | 4 | — |
GH20
Capsular polysaccharide (bacteria), Mucin, N-glycan (host glycan, human milk oligosaccharides, chitin), Lacto-n-tetraose (human milk oligosaccharides)
GH38
Mannosyl-oligosaccharide
GH125
Alpha-mannan, plant n-glycan
GH92
Mannosyl-oligosaccharide, Host n-glycan
|
Europe |
| ShaoY_2019_ERR3405726_bin.1_CGC14 | — | 5 | 1 | — |
CBM50
Chitin or peptidoglycan
GH23
Chitin, Peptidoglycan
|
Europe |
| ShaoY_2019_ERR3405726_bin.1_CGC16 | — | 11 | 1 | — |
CBM50
Chitin or peptidoglycan
|
Europe |
| ShaoY_2019_ERR3405726_bin.1_CGC17 | CGCFAM_00598 | 17 | 6 | — |
GT4
GT2
GT113
GH25
Peptidoglycan
GT51
|
Europe |
| ShaoY_2019_ERR3405726_bin.1_CGC18 | — | 6 | 2 | — |
GT4
|
Europe |
| ShaoY_2019_ERR3405726_bin.1_CGC19 | CGCFAM_03664 | 9 | 1 | — |
GH1
Strictosidine (monoterpene indole alkaloids), Beta-fucosides, Beta-galactoside, 6-phospho-beta-galactoside, Beta-glucan, Beta-glucoside, 6-phospho-beta-glucoside, Ceramide b-galactosidase, Beta-glucuronoside, Beta-mannoside, Glc-conjugated aba (plant), Raucaffricine (glucoalkaloid), Lactose in milk, phlorizin (polyphenols) in fruit, Rutin (polyphenol), Amygdalin (cyanogenic glycosides), Prunasin (cyanogenic glycosides), Vicianin (cyanogenic glycosides), Glucosinolates (sulfur-containing phytochemicals), Beta-primeverosides (tea plant phytochemicals), Daidzin and genistin, furcatin (polyphenol), Dimboa glucoside (polyphenol), Furostanol (polyphenol), Phlorizin (polyphenols) in fruit, Isoflavone, Rutin, beta-xyloside
|
Europe |
| ShaoY_2019_ERR3405726_bin.1_CGC2 | CGCFAM_00067 | 6 | 3 | galactan |
GH36
Alpha-galactoside (galactose oligosaccharides, galactomannans and galactolipid), Acetylgalactosamine (human blood group a and b, mucin glycoproteins), Raffinose/stachyose oligosaccharides (plant seeds), Raffinose oligosaccharides
GH13
Starch, glycogen, and malto-oligosaccharides, Cyclodextrin (alpha-1, 4 glycosidic glucan from starch degradation), Glycogen, Pullulan (starch degradation by fungi), and alpha-1, 6 glucan, Glucosylglycerate, Maltooligosaccharides, Amylopectin (starch), Cyclomaltodextrins, Maltose, Sucrose, Trehalose
|
Europe |
| ShaoY_2019_ERR3405726_bin.1_CGC20 | — | 6 | 2 | — |
GH8
Beta-glucan (laminarin, lichenin and cereal d-glucans), Beta-glucan (lichenin and cereal beta-glucan), Cellulose, Chitosan, Xylan
GT2
|
Europe |