Cluster: ShaoY_2019_ERR3405726_bin.1_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405726_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405726_bin.1_k141_126 | ShaoY_2019_ERR3405726_bin.1_k141_126_3 | 6291 | 7073 | - | CE1 |
| pfam | ShaoY_2019_ERR3405726_bin.1_k141_126 | ShaoY_2019_ERR3405726_bin.1_k141_126_4 | 7144 | 8802 | - | Lactamase_B | RMMBL | Lactamase_B_2 | RNase_J_C | RNase_J_b_CASP |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405726_bin.1_k141_126 | ShaoY_2019_ERR3405726_bin.1_k141_126_5 | 9008 | 9550 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ShaoY_2019_ERR3405726_bin.1_k141_126 | ShaoY_2019_ERR3405726_bin.1_k141_126_6 | 10448 | 11212 | - | 3.A.1.34.1 |
| TC | ShaoY_2019_ERR3405726_bin.1_k141_126 | ShaoY_2019_ERR3405726_bin.1_k141_126_7 | 11209 | 12075 | - | 3.A.1.34.1 |
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_126_3
Type: CAZyme
Location: 6291 - 7073 (-)
Type: CAZyme
Location: 6291 - 7073 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_126_4
Type: pfam
Location: 7144 - 8802 (-)
Type: pfam
Location: 7144 - 8802 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_126_5
Type:
Location: 9008 - 9550 (-)
Type:
Location: 9008 - 9550 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_126_6
Type: TC
Location: 10448 - 11212 (-)
Type: TC
Location: 10448 - 11212 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_126_7
Type: TC
Location: 11209 - 12075 (-)
Type: TC
Location: 11209 - 12075 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus parasanguinis_H
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.