Cluster: ShaoY_2019_ERR3405726_bin.1_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405726_bin.1
- CGC Family ID: CGCFAM_01048
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405726_bin.1_k141_635 | ShaoY_2019_ERR3405726_bin.1_k141_635_38 | 34235 | 35866 | + | 2.A.58.2.2 |
| CAZyme | ShaoY_2019_ERR3405726_bin.1_k141_635 | ShaoY_2019_ERR3405726_bin.1_k141_635_39 | 36022 | 37179 | + | CE9 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405726_bin.1_k141_635 | ShaoY_2019_ERR3405726_bin.1_k141_635_40 | 37353 | 37571 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ShaoY_2019_ERR3405726_bin.1_k141_635 | ShaoY_2019_ERR3405726_bin.1_k141_635_41 | 37568 | 38410 | + | 8.A.5.1.6 |
| TC | ShaoY_2019_ERR3405726_bin.1_k141_635 | ShaoY_2019_ERR3405726_bin.1_k141_635_42 | 38678 | 43099 | + | 2.A.7.3.49 |
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_635_38
Type: TC
Location: 34235 - 35866 (+)
Type: TC
Location: 34235 - 35866 (+)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_635_39
Type: CAZyme
Location: 36022 - 37179 (+)
Type: CAZyme
Location: 36022 - 37179 (+)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_635_40
Type:
Location: 37353 - 37571 (+)
Type:
Location: 37353 - 37571 (+)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_635_41
Type: TC
Location: 37568 - 38410 (+)
Type: TC
Location: 37568 - 38410 (+)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_635_42
Type: TC
Location: 38678 - 43099 (+)
Type: TC
Location: 38678 - 43099 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus parasanguinis_H
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.