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Cluster: ShaoY_2019_ERR3405726_bin.1_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3405726_bin.1_k141_894 ShaoY_2019_ERR3405726_bin.1_k141_894_240 240138 240455 - 3.A.14.1.2
TC ShaoY_2019_ERR3405726_bin.1_k141_894 ShaoY_2019_ERR3405726_bin.1_k141_894_241 240452 241261 - 3.A.14.1.1
TC ShaoY_2019_ERR3405726_bin.1_k141_894 ShaoY_2019_ERR3405726_bin.1_k141_894_242 241416 242357 - 3.A.14.1.1
pfam ShaoY_2019_ERR3405726_bin.1_k141_894 ShaoY_2019_ERR3405726_bin.1_k141_894_243 242445 242846 - DUF1033
CAZyme ShaoY_2019_ERR3405726_bin.1_k141_894 ShaoY_2019_ERR3405726_bin.1_k141_894_244 243056 244159 - GH8
CAZyme ShaoY_2019_ERR3405726_bin.1_k141_894 ShaoY_2019_ERR3405726_bin.1_k141_894_245 244168 245478 - GT2
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_894_240
Type: TC
Location: 240138 - 240455 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_894_241
Type: TC
Location: 240452 - 241261 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_894_242
Type: TC
Location: 241416 - 242357 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_894_243
Type: pfam
Location: 242445 - 242846 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_894_244
Type: CAZyme
Location: 243056 - 244159 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_894_245
Type: CAZyme
Location: 244168 - 245478 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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