Cluster: ShaoY_2019_ERR3405726_bin.1_CGC19
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405726_bin.1
- CGC Family ID: CGCFAM_03664
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405726_bin.1_k141_894 | ShaoY_2019_ERR3405726_bin.1_k141_894_178 | 180628 | 182013 | - | GH1 |
| peptidase | ShaoY_2019_ERR3405726_bin.1_k141_894 | ShaoY_2019_ERR3405726_bin.1_k141_894_179 | 182150 | 182845 | - | C26.UPW |
| TC | ShaoY_2019_ERR3405726_bin.1_k141_894 | ShaoY_2019_ERR3405726_bin.1_k141_894_180 | 183024 | 184544 | - | 3.A.1.12.8 |
| TC | ShaoY_2019_ERR3405726_bin.1_k141_894 | ShaoY_2019_ERR3405726_bin.1_k141_894_181 | 184537 | 185265 | - | 3.A.1.12.8 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3405726_bin.1_k141_894 | ShaoY_2019_ERR3405726_bin.1_k141_894_182 | 185258 | 185452 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | ShaoY_2019_ERR3405726_bin.1_k141_894 | ShaoY_2019_ERR3405726_bin.1_k141_894_183 | 185608 | 186057 | - | MarR |
| TC | ShaoY_2019_ERR3405726_bin.1_k141_894 | ShaoY_2019_ERR3405726_bin.1_k141_894_184 | 186315 | 187298 | + | 3.A.1.23.1 |
| pfam | ShaoY_2019_ERR3405726_bin.1_k141_894 | ShaoY_2019_ERR3405726_bin.1_k141_894_185 | 187291 | 188079 | + | CbiQ |
| TC | ShaoY_2019_ERR3405726_bin.1_k141_894 | ShaoY_2019_ERR3405726_bin.1_k141_894_186 | 188092 | 188817 | + | 3.A.1.23.1 |
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_894_178
Type: CAZyme
Location: 180628 - 182013 (-)
Type: CAZyme
Location: 180628 - 182013 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_894_179
Type: peptidase
Location: 182150 - 182845 (-)
Type: peptidase
Location: 182150 - 182845 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_894_180
Type: TC
Location: 183024 - 184544 (-)
Type: TC
Location: 183024 - 184544 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_894_181
Type: TC
Location: 184537 - 185265 (-)
Type: TC
Location: 184537 - 185265 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_894_182
Type:
Location: 185258 - 185452 (-)
Type:
Location: 185258 - 185452 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_894_183
Type: TF
Location: 185608 - 186057 (-)
Type: TF
Location: 185608 - 186057 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_894_184
Type: TC
Location: 186315 - 187298 (+)
Type: TC
Location: 186315 - 187298 (+)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_894_185
Type: pfam
Location: 187291 - 188079 (+)
Type: pfam
Location: 187291 - 188079 (+)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_894_186
Type: TC
Location: 188092 - 188817 (+)
Type: TC
Location: 188092 - 188817 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus parasanguinis_H
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.