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Cluster: ShaoY_2019_ERR3405726_bin.1_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3405726_bin.1_k141_166 ShaoY_2019_ERR3405726_bin.1_k141_166_11 10017 12239 - GH36
CAZyme ShaoY_2019_ERR3405726_bin.1_k141_166 ShaoY_2019_ERR3405726_bin.1_k141_166_12 12520 13962 - GH13_18
TC ShaoY_2019_ERR3405726_bin.1_k141_166 ShaoY_2019_ERR3405726_bin.1_k141_166_13 14258 15091 - 3.A.1.1.28
TC ShaoY_2019_ERR3405726_bin.1_k141_166 ShaoY_2019_ERR3405726_bin.1_k141_166_14 15105 15971 - 3.A.1.1.28
TC ShaoY_2019_ERR3405726_bin.1_k141_166 ShaoY_2019_ERR3405726_bin.1_k141_166_15 15985 17244 - 3.A.1.1.28
CAZyme ShaoY_2019_ERR3405726_bin.1_k141_166 ShaoY_2019_ERR3405726_bin.1_k141_166_16 17259 19421 - GH36
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_166_11
Type: CAZyme
Location: 10017 - 12239 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_166_12
Type: CAZyme
Location: 12520 - 13962 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_166_13
Type: TC
Location: 14258 - 15091 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_166_14
Type: TC
Location: 15105 - 15971 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_166_15
Type: TC
Location: 15985 - 17244 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_166_16
Type: CAZyme
Location: 17259 - 19421 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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