Cluster: ShaoY_2019_ERR3405726_bin.1_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405726_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405726_bin.1_k141_677 | ShaoY_2019_ERR3405726_bin.1_k141_677_29 | 33421 | 33960 | + | 4.F.1.1.8 |
| TC | ShaoY_2019_ERR3405726_bin.1_k141_677 | ShaoY_2019_ERR3405726_bin.1_k141_677_30 | 33961 | 34785 | + | 3.A.1.25.6 |
| TC | ShaoY_2019_ERR3405726_bin.1_k141_677 | ShaoY_2019_ERR3405726_bin.1_k141_677_31 | 34770 | 35612 | + | 3.A.1.25.6 |
| TC | ShaoY_2019_ERR3405726_bin.1_k141_677 | ShaoY_2019_ERR3405726_bin.1_k141_677_32 | 35605 | 36402 | + | 3.A.1.25.6 |
| CAZyme | ShaoY_2019_ERR3405726_bin.1_k141_677 | ShaoY_2019_ERR3405726_bin.1_k141_677_33 | 36560 | 37201 | + | CBM50 | GH23 |
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_677_29
Type: TC
Location: 33421 - 33960 (+)
Type: TC
Location: 33421 - 33960 (+)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_677_30
Type: TC
Location: 33961 - 34785 (+)
Type: TC
Location: 33961 - 34785 (+)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_677_31
Type: TC
Location: 34770 - 35612 (+)
Type: TC
Location: 34770 - 35612 (+)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_677_32
Type: TC
Location: 35605 - 36402 (+)
Type: TC
Location: 35605 - 36402 (+)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_677_33
Type: CAZyme
Location: 36560 - 37201 (+)
Type: CAZyme
Location: 36560 - 37201 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus parasanguinis_H
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.