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Cluster: ShaoY_2019_ERR3405726_bin.1_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3405726_bin.1_k141_555 ShaoY_2019_ERR3405726_bin.1_k141_555_108 94970 96397 - GT5
pfam ShaoY_2019_ERR3405726_bin.1_k141_555 ShaoY_2019_ERR3405726_bin.1_k141_555_109 96397 97533 - NTP_transferase | Hexapep_GlmU
pfam ShaoY_2019_ERR3405726_bin.1_k141_555 ShaoY_2019_ERR3405726_bin.1_k141_555_110 97523 98665 - NTP_transferase | NTP_transf_3 | Hexapep_GlmU
CAZyme ShaoY_2019_ERR3405726_bin.1_k141_555 ShaoY_2019_ERR3405726_bin.1_k141_555_111 98717 100624 - CBM48 | GH13_9
TC ShaoY_2019_ERR3405726_bin.1_k141_555 ShaoY_2019_ERR3405726_bin.1_k141_555_112 100955 102688 - 8.A.7.1.1
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_555_108
Type: CAZyme
Location: 94970 - 96397 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_555_109
Type: pfam
Location: 96397 - 97533 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_555_110
Type: pfam
Location: 97523 - 98665 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_555_111
Type: CAZyme
Location: 98717 - 100624 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_555_112
Type: TC
Location: 100955 - 102688 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
ShaoY_2019_ERR3405726_bin.1_k141_555_112 vegetarian > omnivore 1.26781 0.00433

🧭 Explore Read Mapping of CGC

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