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Cluster: ShaoY_2019_ERR3405726_bin.1_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3405726_bin.1_k141_894 ShaoY_2019_ERR3405726_bin.1_k141_894_130 130437 131471 + GT4
CAZyme ShaoY_2019_ERR3405726_bin.1_k141_894 ShaoY_2019_ERR3405726_bin.1_k141_894_131 131473 132795 + GT4
pfam ShaoY_2019_ERR3405726_bin.1_k141_894 ShaoY_2019_ERR3405726_bin.1_k141_894_132 133122 135065 + tRNA-synt_2b | TGS | HGTP_anticodon | tRNA_SAD
TC ShaoY_2019_ERR3405726_bin.1_k141_894 ShaoY_2019_ERR3405726_bin.1_k141_894_133 135277 136305 - 9.B.145.1.2
TF ShaoY_2019_ERR3405726_bin.1_k141_894 ShaoY_2019_ERR3405726_bin.1_k141_894_134 136780 137481 + Trans_reg_C
TC ShaoY_2019_ERR3405726_bin.1_k141_894 ShaoY_2019_ERR3405726_bin.1_k141_894_135 137474 138826 + 2.A.21.9.1
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_894_130
Type: CAZyme
Location: 130437 - 131471 (+)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_894_131
Type: CAZyme
Location: 131473 - 132795 (+)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_894_132
Type: pfam
Location: 133122 - 135065 (+)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_894_133
Type: TC
Location: 135277 - 136305 (-)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_894_134
Type: TF
Location: 136780 - 137481 (+)
Gene ID: ShaoY_2019_ERR3405726_bin.1_k141_894_135
Type: TC
Location: 137474 - 138826 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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