y
Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_28.48 |
Family | GH35 |
Protein Properties | Length: 841 Molecular Weight: 94017.9 Isoelectric Point: 5.7293 |
Chromosome | Chromosome/Scaffold: 28 Start: 613507 End: 619031 |
Description | beta-galactosidase 7 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 50 | 352 | 0 |
TIDGHRKILLSGSIHYPRSTSQMWPDLIKKAKEGGLDAIETYVFWNVHEPQRRQYDFTGNLDIVRFIKTIQQEGLYSVVRIGPYVCAEWNYGGFPVWLHN MPGIEFRTANNVYMNEMQNFTTLIVDMLRKEKLFASQGGPIILAQIENEYGNVMSSYGDAGKAYINWCANMADSLHIGVPWLMCQQTDAPQPMIETCNGF YCDSYTPKNPTSPKMWTENWTGWFKSWGGKDPYRTTEDLAYSVARFFQRGGTFQNYYMYHGGTNFGRTAGGPYITTSYDYNAPLDEYGNLNQPKWGHLKQ LHS |
Full Sequence |
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Protein Sequence Length: 841 Download |
METLDVEPEI QQSAPNRRRF SEYAPLLLSY RLNQLWPPLV CVAHDERAIT IDGHRKILLS 60 GSIHYPRSTS QMWPDLIKKA KEGGLDAIET YVFWNVHEPQ RRQYDFTGNL DIVRFIKTIQ 120 QEGLYSVVRI GPYVCAEWNY GGFPVWLHNM PGIEFRTANN VYMNEMQNFT TLIVDMLRKE 180 KLFASQGGPI ILAQIENEYG NVMSSYGDAG KAYINWCANM ADSLHIGVPW LMCQQTDAPQ 240 PMIETCNGFY CDSYTPKNPT SPKMWTENWT GWFKSWGGKD PYRTTEDLAY SVARFFQRGG 300 TFQNYYMYHG GTNFGRTAGG PYITTSYDYN APLDEYGNLN QPKWGHLKQL HSVLKSMEKT 360 LTYGNISTLD FGSSVAATIY ATDEASSCFL GNANETSDAT INFQDADYVI PAWSVSILPD 420 CKTVAFNTAK VNTQTSVMIK KPNEANSSIL EWMWRPEFTH DTIVRGKGQI VANRIVDQKE 480 MASDASDYLW YMTSVNLGKD DAMWSNNMTL RVHGSGQILH SYVNGKYIGS QWAKYNIFNH 540 VFEKEVKLSP GHNKIVILSA TVGLQNYGPM FDLTQAGVPG PVEIVGHKGD ETIIKDLSSN 600 KWSYKIGLNG LDNQLFNPDC KRVKWSMDNV PVNRNLTWYK ASFKAPLGTD PVVVDLLGLG 660 KGEAWINGHS IGRYWPSFIA DEQGCSDAVC DYRGSYNGDK CVSNCGQPTQ RYYHVPRSFL 720 NEDVNTIVLF EEFGGNPSQV DFQPVVVGSA CATVSEGNTV ELSCHGRPIS GVRFASLGNP 780 QGVCGAFEKT SCDSDKDVVS IVEDQCVGKE SCSFKVSQDV FGSPNCFDAP INRLAVEVSC 840 * 900 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 2.0e-6 | 64 | 219 | 170 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 2.0e-12 | 762 | 840 | 82 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 1.0e-24 | 42 | 344 | 363 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 3.0e-160 | 48 | 352 | 320 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 26 | 840 | 849 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAJ09953.1 | 0 | 27 | 840 | 7 | 827 | beta-galactosidase [Mangifera indica] |
EMBL | CBI27773.1 | 0 | 40 | 840 | 38 | 835 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002297749.1 | 0 | 36 | 840 | 19 | 823 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516237.1 | 0 | 42 | 840 | 25 | 825 | beta-galactosidase, putative [Ricinus communis] |
RefSeq | XP_002516256.1 | 0 | 42 | 840 | 47 | 848 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 51 | 350 | 17 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 5.99994e-41 | 52 | 360 | 21 | 337 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 5.99994e-41 | 52 | 360 | 21 | 337 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO778160 | 721 | 42 | 753 | 0 |
HO780602 | 659 | 92 | 742 | 0 |
HO795552 | 529 | 132 | 656 | 0 |
HO795552 | 52 | 42 | 93 | 0 |
HO795552 | 40 | 93 | 132 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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