y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.007G018100.6 |
Family | GH35 |
Protein Properties | Length: 627 Molecular Weight: 70103.5 Isoelectric Point: 6.4063 |
Chromosome | Chromosome/Scaffold: 07 Start: 1389451 End: 1394092 |
Description | beta-galactosidase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 36 | 339 | 0 |
IMINGQRRILFSGSIHYPRSTPDMWEDLIQKAKDGGIDVIETYVFWNVHEPTPGNYHFEGRYDIVRFMKTIQRAGLYAHLRIGPYVCAEWNFGGFPVWLK YVPGISFRTDNEPFKRAMQGFTEKIVGLMKAENLFESQGGPIILSQIENEYGVQSKLFGAAGYNYMTWAANMAIQTGTGVPWVMCKEDDAPDPVINTCNG FYCDSFAPNKPYKPTIWTEAWSGWFSEFGGTIHQRPVQDLAFAVAKFIQKGGSFINYYMFHGGTNFGRSAGGPFITTSYDYDAPIDEYGLIRQPKYGHLK ELHR |
Full Sequence |
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Protein Sequence Length: 627 Download |
MGTNSAYKLC SLVFLVVFLG CSELIQCSVT YDRKAIMING QRRILFSGSI HYPRSTPDMW 60 EDLIQKAKDG GIDVIETYVF WNVHEPTPGN YHFEGRYDIV RFMKTIQRAG LYAHLRIGPY 120 VCAEWNFGGF PVWLKYVPGI SFRTDNEPFK RAMQGFTEKI VGLMKAENLF ESQGGPIILS 180 QIENEYGVQS KLFGAAGYNY MTWAANMAIQ TGTGVPWVMC KEDDAPDPVI NTCNGFYCDS 240 FAPNKPYKPT IWTEAWSGWF SEFGGTIHQR PVQDLAFAVA KFIQKGGSFI NYYMFHGGTN 300 FGRSAGGPFI TTSYDYDAPI DEYGLIRQPK YGHLKELHRS IKMCERALVS VDPIITQLGT 360 YQQVHVYSTE SGDCAAFLAN YDTKSAARVL FNNMHYNLPP WSISILPDCR NVVFNTAKVG 420 VQTSQMEMLP TNGIFSWESY DEDISSLDDS STFTTAGLLE QINVTRDASD YLWYMTSVDI 480 GSSESFLHGG ELPTLIIQST GHAVHIFING QLSGSAFGTR ENRRFTYTGK VNLRPGTNRI 540 ALLSVAVGLP NVGGHYESWN TGILGPVALH GLDQGKWDLS WQKWTYQVGL KGEAMNLLSP 600 DSVTSVEWMQ SSLAAQRPQP LTWHKV* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 0.0002 | 51 | 189 | 155 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 2.0e-20 | 29 | 331 | 366 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 6.0e-162 | 35 | 341 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 12 | 625 | 616 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAW47739.1 | 0 | 1 | 626 | 1 | 626 | beta-galactosidase [Prunus persica] |
DDBJ | BAD91082.1 | 0 | 1 | 626 | 1 | 627 | beta-D-galactosidase [Pyrus pyrifolia] |
RefSeq | NP_568001.1 | 0 | 1 | 626 | 4 | 631 | BGAL3 (beta-galactosidase 3); beta-galactosidase/ catalytic/ cation binding / sugar binding [Arabidopsis thaliana] |
RefSeq | XP_002274449.1 | 0 | 1 | 626 | 1 | 626 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310279.1 | 0 | 1 | 626 | 1 | 626 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 33 | 337 | 12 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 9.99995e-41 | 29 | 337 | 11 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 9.99995e-41 | 29 | 337 | 11 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_B | 9.99995e-41 | 29 | 337 | 11 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_A | 9.99995e-41 | 29 | 337 | 11 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |