y
Basic Information | |
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Species | Oryza sativa |
Cazyme ID | LOC_Os03g06940.1 |
Family | GH35 |
Protein Properties | Length: 842 Molecular Weight: 92172.3 Isoelectric Point: 6.2375 |
Chromosome | Chromosome/Scaffold: 3 Start: 3525078 End: 3531357 |
Description | beta-galactosidase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 35 | 337 | 0 |
LVDGQRRILFSGSIHYPRSTPEMWDGLIEKAKDGGLDVIQTYVFWNGHEPTPGNYNFEGRYDLVRFIKTVQKAGMFVHLRIGPYICGEWNFGGFPVWLKY VPGISFRTDNEPFKNAMQGFTEKIVGMMKSENLFASQGGPIILSQIENEYGPEGKEFGAAGKAYINWAAKMAVGLDTGVPWVMCKEDDAPDPVINACNGF YCDTFSPNKPYKPTMWTEAWSGWFTEFGGTIRQRPVEDLAFGVARFVQKGGSFINYYMYHGGTNFGRTAGGPFITTSYDYDAPLDEYGLAREPKFGHLKE LHR |
Full Sequence |
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Protein Sequence Length: 842 Download |
MGRGCLAALL GGAVAVAVLV AVVHCAVTYD KKAVLVDGQR RILFSGSIHY PRSTPEMWDG 60 LIEKAKDGGL DVIQTYVFWN GHEPTPGNYN FEGRYDLVRF IKTVQKAGMF VHLRIGPYIC 120 GEWNFGGFPV WLKYVPGISF RTDNEPFKNA MQGFTEKIVG MMKSENLFAS QGGPIILSQI 180 ENEYGPEGKE FGAAGKAYIN WAAKMAVGLD TGVPWVMCKE DDAPDPVINA CNGFYCDTFS 240 PNKPYKPTMW TEAWSGWFTE FGGTIRQRPV EDLAFGVARF VQKGGSFINY YMYHGGTNFG 300 RTAGGPFITT SYDYDAPLDE YGLAREPKFG HLKELHRAVK LCEQPLVSAD PTVTTLGSMQ 360 EAHVFRSSSG CAAFLANYNS NSYAKVIFNN ENYSLPPWSI SILPDCKNVV FNTATVGVQT 420 NQMQMWADGA SSMMWEKYDE EVDSLAAAPL LTSTGLLEQL NVTRDTSDYL WYITSVEVDP 480 SEKFLQGGTP LSLTVQSAGH ALHVFINGQL QGSAYGTRED RKISYSGNAN LRAGTNKVAL 540 LSVACGLPNV GVHYETWNTG VVGPVVIHGL DEGSRDLTWQ TWSYQVGLKG EQMNLNSLEG 600 SGSVEWMQGS LVAQNQQPLA WYRAYFDTPS GDEPLALDMG SMGKGQIWIN GQSIGRYWTA 660 YAEGDCKGCH YTGSYRAPKC QAGCGQPTQR WYHVPRSWLQ PTRNLLVVFE ELGGDSSKIA 720 LAKRTVSGVC ADVSEYHPNI KNWQIESYGE PEFHTAKVHL KCAPGQTISA IKFASFGTPL 780 GTCGTFQQGE CHSINSNSVL EKKCIGLQRC VVAISPSNFG GDPCPEVMKR VAVEAVCSTA 840 A* 900 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 0.0005 | 49 | 132 | 85 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 3.0e-19 | 27 | 328 | 344 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 2.0e-21 | 760 | 837 | 82 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 5.0e-166 | 35 | 339 | 320 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 26 | 838 | 814 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005515 | protein binding |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005623 | cell |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM22973.1 | 0 | 24 | 841 | 24 | 843 | AF499737_1 beta-galactosidase [Oryza sativa Japonica Group] |
GenBank | ABF94150.1 | 0 | 24 | 802 | 24 | 802 | Beta-galactosidase precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] |
GenBank | EEC74580.1 | 0 | 24 | 841 | 24 | 851 | hypothetical protein OsI_10152 [Oryza sativa Indica Group] |
GenBank | EEE58382.1 | 0 | 24 | 841 | 24 | 851 | hypothetical protein OsJ_09539 [Oryza sativa Japonica Group] |
RefSeq | NP_001049068.1 | 0 | 24 | 841 | 24 | 841 | Os03g0165400 [Oryza sativa (japonica cultivar-group)] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 31 | 335 | 12 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 9.99995e-41 | 27 | 351 | 11 | 347 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 9.99995e-41 | 27 | 351 | 11 | 347 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |