y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10025947m |
Family | GH35 |
Protein Properties | Length: 741 Molecular Weight: 83213.9 Isoelectric Point: 8.8522 |
Chromosome | Chromosome/Scaffold: 8 Start: 11896594 End: 11901172 |
Description | beta-galactosidase 10 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 40 | 341 | 0 |
IGNRRQLIISAAIHYPRSVPAMWPSLVQTAKEGGCNAIESYVFWNGHEPSPGKYYFGGRYNLVKFIKIVQQAGMHMILRIGPFVAAEWNYGGVPVWLHYV PGTVFRADNEPWKHYMESFTTYIVNLLKKEKLFAPQGGPIILSQVENEYGYYEKDYGEGGKRYAQWSASMAVSQNIGVPWMMCQQWDAPPTVISTCNGFY CDQFTPNTPDKPKIWTENWPGWFKTFGGRDPHRPAEDVAYSVARFFGKGGSVHNYYMYHGGTNFGRTSGGPFITTSYDYEAPIDEYGLPRLPKWGHLKNL HK |
Full Sequence |
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Protein Sequence Length: 741 Download |
MKRLTESIAS SAILLAMVFL WSLRAIEAAN VTYDHRSLSI GNRRQLIISA AIHYPRSVPA 60 MWPSLVQTAK EGGCNAIESY VFWNGHEPSP GKYYFGGRYN LVKFIKIVQQ AGMHMILRIG 120 PFVAAEWNYG GVPVWLHYVP GTVFRADNEP WKHYMESFTT YIVNLLKKEK LFAPQGGPII 180 LSQVENEYGY YEKDYGEGGK RYAQWSASMA VSQNIGVPWM MCQQWDAPPT VISTCNGFYC 240 DQFTPNTPDK PKIWTENWPG WFKTFGGRDP HRPAEDVAYS VARFFGKGGS VHNYYMYHGG 300 TNFGRTSGGP FITTSYDYEA PIDEYGLPRL PKWGHLKNLH KAIMLSENLL ISGEHQNFTL 360 GHSLEADVYT DSLGTCAAFL SNLDDKSDKT VMFRNTSYHL PAWSVSILPD CKNEVYNTAK 420 VTSKSSKVEM LPEDLKSTSG LKWEVFSEKP GIWGEADFVK NELVDHINTT KDTTDYLWYT 480 TSIKVSDTEE FLKKGNRPVL FIESKGHTLH VFINKEYLGT ATGNGTHVPF KLKKSVSLKA 540 GENNIDLLSM TVGLSNAGSF YEWVAAGLTS VSIKGFSKGT LNLTNSKWSY KLGVQGEHLE 600 LFKPGNSGAV QWTVTTKPPK KQPLTWYKVV IDPPSGSEPV GLDMVSMGKG MAWLNGEEIG 660 RYWPRIARKN SPNDECVKEC DYRGKFMPDK CLTGCGEPSQ RWYHVPRSWF KSSGNELVIF 720 EEKGGNPMKI KLSKRKVSVV * 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 0.002 | 53 | 136 | 85 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 1.0e-15 | 31 | 333 | 347 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 1.0e-145 | 37 | 343 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 13 | 740 | 730 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD91080.1 | 0 | 30 | 740 | 28 | 742 | beta-D-galactosidase [Pyrus pyrifolia] |
EMBL | CAB64746.1 | 0 | 1 | 740 | 1 | 741 | putative beta-galactosidase [Arabidopsis thaliana] |
EMBL | CBI21600.1 | 0 | 28 | 740 | 20 | 737 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_201186.1 | 0 | 1 | 740 | 1 | 741 | BGAL10 (beta-galactosidase 10); beta-galactosidase/ catalytic/ cation binding [Arabidopsis thaliana] |
RefSeq | XP_002310540.1 | 0 | 13 | 740 | 1 | 717 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 6e-40 | 46 | 339 | 23 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 2e-32 | 48 | 326 | 28 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 2e-32 | 48 | 326 | 28 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_B | 2e-32 | 48 | 326 | 28 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |