y
Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.342700.1 |
Family | GH35 |
Protein Properties | Length: 845 Molecular Weight: 93059.8 Isoelectric Point: 8.2639 |
Chromosome | Chromosome/Scaffold: 03356 Start: 4984670 End: 4991455 |
Description | beta-galactosidase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 37 | 339 | 0 |
LINGQRRILISGSIHYPRSTPEMWDDLMQKAKDGGLDVVDTYVFWNVHEPSPGNYDFEGRYDLVRFIKTAQRVGLYVHLRIGPYVCAEWNFGGFPVWLKY VPGISFRTDNGPFKMAMQGFTQKIVQMMKSEKLFASQGGPIILSQIENEYGPQSKALGAAGHAYMNWAAKMAVGLNTGVPWVMCKEDDAPDPVINSCNGF YCDYFSPNKPYKPTLWTEAWSGWFTEFGGPVYGRPVQDLAFAVARFVQKGGSLFNYYMYHGGTNFGRTAGGPFITTSYDYDAPLDEYGMLRQPKYGHLKN LHR |
Full Sequence |
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Protein Sequence Length: 845 Download |
METFSVSSFL FFVFLAALLG FRSTQCTTVT YDKKAILING QRRILISGSI HYPRSTPEMW 60 DDLMQKAKDG GLDVVDTYVF WNVHEPSPGN YDFEGRYDLV RFIKTAQRVG LYVHLRIGPY 120 VCAEWNFGGF PVWLKYVPGI SFRTDNGPFK MAMQGFTQKI VQMMKSEKLF ASQGGPIILS 180 QIENEYGPQS KALGAAGHAY MNWAAKMAVG LNTGVPWVMC KEDDAPDPVI NSCNGFYCDY 240 FSPNKPYKPT LWTEAWSGWF TEFGGPVYGR PVQDLAFAVA RFVQKGGSLF NYYMYHGGTN 300 FGRTAGGPFI TTSYDYDAPL DEYGMLRQPK YGHLKNLHRA IKLCEHALVS SDPTVTSLGA 360 YEQAHVFSSG PGRCAAFLAN YHTNSAATVV FNNMRYALPA WSISILPDCK RVVFNTAQVG 420 VHIAQTQMLP TISKLSWETY NEDTYSLGGS SRMTVAGLLE QINVTRDTSD YLWYMTSVGI 480 SSSEAFLRGG QKPTLSVRSA GHAVHVFING QFSGSAYGSR EHPAFTYTGP INLRAGMNKI 540 ALLSIAVGLP NVGLHFEKWQ TGILGPISIS GLNGGKKDLT WQKWSYQVGL KGEAMNLVSP 600 TEATSVDWIK GSLLQGQRPL TWYKASFNAP RGNEPLALDL RSMGKGQAWI NGQSIGRYWM 660 AYAKGGCSRC TYAGTYRPPT CENGCGQPTQ RWYHVPRSWL KPTNNVLVLF EELGGDASKI 720 SLMRRSVTGL CGEAVEYHAK NDSYIIESNE ELDSLHLQCN PGQVISAIKF ASFGTPSGTC 780 GSYQKGTCHA PDSHAIIEKK CIGLKSCSVS TTRDNFGVDP CPNELKQLLV EVDCGITDIN 840 GHGS* 900 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 1.0e-7 | 57 | 187 | 154 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 1.0e-21 | 757 | 834 | 81 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 3.0e-24 | 29 | 331 | 358 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 6.0e-166 | 35 | 341 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 23 | 834 | 817 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK81874.1 | 0 | 1 | 837 | 1 | 844 | putative beta-galactosidase BG1 [Vitis vinifera] |
EMBL | CAN78072.1 | 0 | 1 | 837 | 1 | 844 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002280715.1 | 0 | 1 | 837 | 1 | 844 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002306893.1 | 0 | 1 | 834 | 1 | 840 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510455.1 | 0 | 1 | 834 | 1 | 839 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 28 | 337 | 7 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 4.00001e-41 | 29 | 353 | 11 | 347 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 4.00001e-41 | 29 | 353 | 11 | 347 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |