y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10011312m |
Family | GH35 |
Protein Properties | Length: 806 Molecular Weight: 89596.5 Isoelectric Point: 5.5188 |
Chromosome | Chromosome/Scaffold: 1 Start: 11068973 End: 11073273 |
Description | beta-galactosidase 15 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 15 | 316 | 0 |
TIDGHRRILLSGSIHYPRSTPEMWPDLIKKGKEGGLDAIETYVFWNAHEPTRRQYDFSGNLDLIRFLKTIQDQGLYGVLRIGPYVCAEWNYGGFPVWLHN MPGMEFRTTNTAFMNEMQNFTTMIVEMVKKEKLFASQGGPIILAQIENEYGNVIGSYGASGKAYIQWCANMAQSLDIGVPWIMCQQDDAPQPMLNTCNGY YCDNFEPNNPNTPKMWTENWTGWFKNWGSKDPHRTSEDVAFAVARFFQRGGTFQNYYMYHGGTNFDRTSGGPYITTSYDYDAPLDEYGNLAQPKYGHLKQ LH |
Full Sequence |
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Protein Sequence Length: 806 Download |
GCAATIVSHD GRAITIDGHR RILLSGSIHY PRSTPEMWPD LIKKGKEGGL DAIETYVFWN 60 AHEPTRRQYD FSGNLDLIRF LKTIQDQGLY GVLRIGPYVC AEWNYGGFPV WLHNMPGMEF 120 RTTNTAFMNE MQNFTTMIVE MVKKEKLFAS QGGPIILAQI ENEYGNVIGS YGASGKAYIQ 180 WCANMAQSLD IGVPWIMCQQ DDAPQPMLNT CNGYYCDNFE PNNPNTPKMW TENWTGWFKN 240 WGSKDPHRTS EDVAFAVARF FQRGGTFQNY YMYHGGTNFD RTSGGPYITT SYDYDAPLDE 300 YGNLAQPKYG HLKQLHDVLH SMEKTLTHGN ITNIDFGNQV SATIYKTEEG SSCFIGNVNE 360 TSDARINFQG TSYDVPPWSV SILPDCKTVT YNTAKINTQT SVMVKKPNEA EDEPSTLKWS 420 WRPENVDNVL LKGKGESTMR QLFDQKVVSN DQSDYLWYMT TVNLKEQDPV WSKNMSIRVN 480 STAHVLHAFV NGQHIGNYRV EDGKFHYVFE QDAKFNPGAN VITFLSITVG LPNYGAFFEN 540 IPAGITGPVF IIGRNGDETI VKDLSAHKWS YKTGLSGFEN QLFSAESPST WSGESVPINR 600 TMTWYKTTFK APLGSEPVVV DLLGLGKGTA WINGNNIGRY WPSFLSGIDG CPAECNYKGA 660 YYAEKCQTNC GEPTQRWYHI PRSFLNSDGD NTLVLFEEIG GNPSLVNFQT IGVGSVCANV 720 YEKNVLELSC NGKPISAIKF ASFGNPGGNC GSFEKGTCEA SNNAAAILTQ ECVGKEKCSI 780 DVSQEKFGAP ECGGDARRLA VEAIC* 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 7.0e-5 | 29 | 190 | 178 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 7.0e-16 | 728 | 805 | 81 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 8.0e-22 | 7 | 309 | 362 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 1.0e-163 | 13 | 316 | 319 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 7 | 805 | 824 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAJ09953.1 | 0 | 7 | 805 | 25 | 827 | beta-galactosidase [Mangifera indica] |
RefSeq | NP_683341.1 | 0 | 2 | 805 | 39 | 786 | BGAL15 (beta-galactosidase 15); beta-galactosidase [Arabidopsis thaliana] |
Swiss-Prot | Q9C6W4 | 0 | 2 | 805 | 16 | 779 | BGL15_ARATH RecName: Full=Beta-galactosidase 15; Short=Lactase 15; Flags: Precursor |
RefSeq | XP_002297749.1 | 0 | 4 | 805 | 22 | 823 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516256.1 | 0 | 3 | 805 | 43 | 848 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 16 | 315 | 17 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 1.99965e-42 | 17 | 325 | 21 | 337 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 1.99965e-42 | 17 | 325 | 21 | 337 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO778160 | 710 | 7 | 709 | 0 |
HO780602 | 614 | 57 | 665 | 0 |
HO795552 | 531 | 97 | 622 | 0 |
HO795552 | 58 | 2 | 58 | 0 |
HO780602 | 36 | 665 | 700 | 0.0000008 |
Sequence Alignments (This image is cropped. Click for full image.) |
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