y
Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.397380.7 |
Family | GH35 |
Protein Properties | Length: 559 Molecular Weight: 62606.7 Isoelectric Point: 6.9756 |
Chromosome | Chromosome/Scaffold: 04146 Start: 212504 End: 218147 |
Description | beta galactosidase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 33 | 336 | 0 |
LVIDGKRRILISGSIHYPRSTPQMWPDLIQKAKDGGLDVIETYVFWNGHEPSPGQYYFEDRYELVRFVKLVQQAGLYVHLRIGPYVCAEWNFGGFPVWLK YVPGIAFRTDNGPFKAAMQKFTAKIVSMMKGEKLYHSQGGPIILSQIENEYGPVEWEIGAPGKSYTKWAAQMALGLDTGVPWVMCKQEDAPDPMIDTCNG FYCENFEPNKAYKPKMWTEAWTGWFTEFGGPVPYRPVEDLAYAVARFIQNRGSLINYYMYHGGTNFGRTAGGPFIATSYDYDAPIDEYGLIRQPKWGHLR DLHK |
Full Sequence |
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Protein Sequence Length: 559 Download |
MLKMSKIMVV FLGLVLWVCS SVMASVTYDH KALVIDGKRR ILISGSIHYP RSTPQMWPDL 60 IQKAKDGGLD VIETYVFWNG HEPSPGQYYF EDRYELVRFV KLVQQAGLYV HLRIGPYVCA 120 EWNFGGFPVW LKYVPGIAFR TDNGPFKAAM QKFTAKIVSM MKGEKLYHSQ GGPIILSQIE 180 NEYGPVEWEI GAPGKSYTKW AAQMALGLDT GVPWVMCKQE DAPDPMIDTC NGFYCENFEP 240 NKAYKPKMWT EAWTGWFTEF GGPVPYRPVE DLAYAVARFI QNRGSLINYY MYHGGTNFGR 300 TAGGPFIATS YDYDAPIDEY GLIRQPKWGH LRDLHKAIKL CEPALVSVDP TVSSLGSKQE 360 AHVYNTRSGE CAAFLANYDP STSVRVTFGN HPYDLPPWSV SILPDCKTVV FNTAKVNAPS 420 YWPKMTPISS FSWHSYNEET ASAYADDTTT MAGLVEQISI TRDATDYLWY MTDIRIDSNE 480 GFLKSGQWPL LTIFSAGHAL HVFINGQLSG TVYGGLDNPK LTFSKYVNLR PGVNKLSMLS 540 VAVGLPVSCF GFLFQAFL* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 4.0e-6 | 48 | 184 | 152 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 3.0e-24 | 26 | 328 | 347 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 1.0e-166 | 32 | 338 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 1 | 546 | 552 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAB61470.1 | 0 | 1 | 545 | 10 | 552 | beta-D-galactosidase [Mangifera indica] |
EMBL | CBI27912.1 | 0 | 1 | 546 | 1 | 543 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002282132.1 | 0 | 1 | 546 | 4 | 546 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002308268.1 | 0 | 20 | 546 | 22 | 548 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514108.1 | 0 | 17 | 546 | 22 | 550 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 2.94273e-44 | 32 | 334 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 1.00053e-42 | 23 | 334 | 8 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 1.00053e-42 | 23 | 334 | 8 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_B | 1.00053e-42 | 23 | 334 | 8 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_A | 1.00053e-42 | 23 | 334 | 8 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |