y
Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10018839m |
Family | GH35 |
Protein Properties | Length: 846 Molecular Weight: 95028.7 Isoelectric Point: 6.5466 |
Chromosome | Chromosome/Scaffold: 3 Start: 37156878 End: 37163307 |
Description | beta-galactosidase 10 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 39 | 340 | 0 |
LIIDGRRKLFLSASIHYPRSVPAMWPELIQAAKEGGLNTIESYVFWSGHELSPGKYSFEGRYDLVKFVKTVQQAGMYMLLRIGPFVAAEYNYGGVPVWLH YIPGSVFRSYSKPFMSYMQKFMTLIVDMMKKEKLFASQGGPIILAQVENEYQWYEQFYKGGKEYAMWAASMAVSQNTGVPWIMCQQYDAPDPVIDTCNSF YCDQFTPHSSKMPKIWTENWPGWFKKFGAPDPHRPHQDVAFSVARFIQKGGSVHNYYMYHGGTNFGRTSGDFVTTSYDYDAPIDEYGLPRNPKWGHLKEL HE |
Full Sequence |
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Protein Sequence Length: 846 Download |
MKRMKILPVR LIVLFIFFSF CCFNSFCLAA NVTYDHRSLI IDGRRKLFLS ASIHYPRSVP 60 AMWPELIQAA KEGGLNTIES YVFWSGHELS PGKYSFEGRY DLVKFVKTVQ QAGMYMLLRI 120 GPFVAAEYNY GGVPVWLHYI PGSVFRSYSK PFMSYMQKFM TLIVDMMKKE KLFASQGGPI 180 ILAQVENEYQ WYEQFYKGGK EYAMWAASMA VSQNTGVPWI MCQQYDAPDP VIDTCNSFYC 240 DQFTPHSSKM PKIWTENWPG WFKKFGAPDP HRPHQDVAFS VARFIQKGGS VHNYYMYHGG 300 TNFGRTSGDF VTTSYDYDAP IDEYGLPRNP KWGHLKELHE AIMLCEGVLL NSDPINLSLG 360 PSQEADVYAD SSGACAAFLS NTDNATDTTV VFRNVSYFLP AWSVSILSDC KNVVFNTAKV 420 STQTSIIEMV PEYLQQSDSS ADEGSKALQW DVFKEMTGIW GEANFVKSGL VDHLNTTKDT 480 TDYLWYTTSI IFSEDEEFLR TGSQPVLLIE SKGHTLHAFI NQELVQGNST YSTGTLVFSF 540 TALIPLKAGK NKIDLLSMTV GLPSAGPFYE WTGTGLTSVK IKGFNNRTLD FSSYNWTYKI 600 GVQGEDLRIY NPDNLTNVNW TPTSEPPKNQ PLTWYKAVVN EPVGDEPIGL DMLHMGKGQA 660 WLNGEPIGRY WDKRSSIDDH CVQECDYRGT FNQQKCLTGS GEPTQRWYHV PRSWFKPSGN 720 ILVIFEEKGG DPTRIRFSRR NISSICGLVA ADEDGNESSN SNATIHLQCP KNRSISTVKF 780 ASFGTPTGKC GSFRMGDCHD PNSTSFVEKV CLNKNKCAIE LTETNFNKGL CPDATKTLAV 840 EVTCS* 900 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 0.004 | 54 | 137 | 85 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 9.0e-17 | 767 | 844 | 81 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 1.0e-17 | 32 | 332 | 348 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 3.0e-147 | 38 | 342 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 32 | 845 | 827 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF70823.1 | 0 | 31 | 845 | 45 | 870 | AF154422_1 beta-galactosidase [Solanum lycopersicum] |
DDBJ | BAD91080.1 | 0 | 31 | 845 | 28 | 851 | beta-D-galactosidase [Pyrus pyrifolia] |
EMBL | CBI21600.1 | 0 | 28 | 845 | 19 | 847 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002310540.1 | 0 | 14 | 845 | 5 | 827 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522927.1 | 0 | 25 | 845 | 22 | 803 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 2e-35 | 38 | 338 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 3e-33 | 32 | 325 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 3e-33 | 32 | 325 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_B | 3e-33 | 32 | 325 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |