y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra000493 |
Family | GH35 |
Protein Properties | Length: 845 Molecular Weight: 92191.4 Isoelectric Point: 7.8048 |
Chromosome | Chromosome/Scaffold: 03 Start: 11393105 End: 11397494 |
Description | beta-galactosidase 8 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 33 | 336 | 0 |
LVIDGKRKILISGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNGHEPHKNKYNFEGRYDLVKFVKLVAKAGLYVHLRIGPYACAEWNYGGFPVWLH FIPGIKFRTDNEPFKAEMQRFTAKIVDLMKQEKLYASQGGPIILSQIENEYGNVDSSYGAAGKSYMKWSASMALSLDTGVPWNMCQQGDAPDPIINTCNG FYCDQFTPNSNNKPKMWTENWSGWFLGFGDPTPYRPVEDLAFAVAIFYQRSGTFQNYYMYHGGTNFERTSGGPLISTSYDYDAPIDEYGLVRQPKWGHLR DLHK |
Full Sequence |
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Protein Sequence Length: 845 Download |
MVRVRKIEIV SCLLLQIVVA ATAANVTYDH RALVIDGKRK ILISGSIHYP RSTPEMWPDL 60 IQKSKDGGLD VIETYVFWNG HEPHKNKYNF EGRYDLVKFV KLVAKAGLYV HLRIGPYACA 120 EWNYGGFPVW LHFIPGIKFR TDNEPFKAEM QRFTAKIVDL MKQEKLYASQ GGPIILSQIE 180 NEYGNVDSSY GAAGKSYMKW SASMALSLDT GVPWNMCQQG DAPDPIINTC NGFYCDQFTP 240 NSNNKPKMWT ENWSGWFLGF GDPTPYRPVE DLAFAVAIFY QRSGTFQNYY MYHGGTNFER 300 TSGGPLISTS YDYDAPIDEY GLVRQPKWGH LRDLHKAIKL CEDALLATDP TVTSLGSNLV 360 ASEYKTSSGL CAAFLANIGT ESDATVTFNG NSYHLPAWSI SILPDCKNVA FNTAKINAAT 420 ESTTFARQAL KPNADSSEEL GSQWSYIKEP IGISKADAFV KPGLLEQINT TADESDYLWY 480 SLRMDIKGDE TFLDEGSKAV LHVQSIGQVV YAFINGKLAG SGNGKQKISL DIPINLVTGK 540 NTIDLLSVTV GLANYGAFFD LFGAGITGPV TLKSAKSGSS IDLSSQQWTY QVGLKGEDTN 600 LGSGDSSEWV SKSPLPTMQP LVWYKTTFDA PSGSDPVAID FTGTGKGIAW VNGQSIGRYW 660 PTSIARNNGC TDLCNYRGSY SSNKCLKNCG KPSQTLYHVP RSWIKPSGNT LVLLEEMGGD 720 PTKISFATKQ TGSSLCLTVS QSHPAPVDSW ASDSKILNRT SPVLSLKCPV STHVITSINF 780 ASFGTPTGTC GSFSHGRCNS PRSLSIVRKA CVGSRSCKVE VSTRVFGDPC RSLAKSLAVE 840 ASCS* 900 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 1.0e-6 | 48 | 200 | 170 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 1.0e-23 | 766 | 843 | 82 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 2.0e-25 | 26 | 328 | 368 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 4.0e-170 | 32 | 338 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 19 | 844 | 833 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD21482.1 | 0 | 1 | 844 | 1 | 839 | putative beta-galactosidase [Arabidopsis thaliana] |
DDBJ | BAD20774.2 | 0 | 1 | 844 | 7 | 851 | beta-galactosidase [Raphanus sativus] |
EMBL | CAB64744.1 | 0 | 1 | 844 | 7 | 852 | putative beta-galactosidase [Arabidopsis thaliana] |
RefSeq | NP_850121.1 | 0 | 1 | 844 | 7 | 852 | BGAL8 (beta-galactosidase 8); beta-galactosidase/ catalytic/ cation binding / sugar binding [Arabidopsis thaliana] |
RefSeq | XP_002530296.1 | 0 | 6 | 844 | 3 | 842 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 2.99878e-43 | 33 | 334 | 15 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.0003 | 512 | 718 | 411 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_B | 2e-35 | 33 | 321 | 10 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_B | 0.007 | 539 | 731 | 439 | 586 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_A | 2e-35 | 33 | 321 | 10 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |