y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra035634 |
Family | GH35 |
Protein Properties | Length: 723 Molecular Weight: 80927.5 Isoelectric Point: 9.0764 |
Chromosome | Chromosome/Scaffold: 02 Start: 7089522 End: 7093858 |
Description | beta-galactosidase 4 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 37 | 338 | 0 |
IINGQRRILLSGSIHYPRSTPEMWPGLIQKAKEGGLDVIETYVFWNGHEPSPGNYYFGDRYDLVKFIKLVQQAGLYVNLRIGPFVCAEWNFGGFPVWLKF VPGIAFRTDNEPFKAAMKKFTEKIVWMMKAERLFQTQGGPIILAQIENEYGPVEWNSGAPAKAYTQWAAQMALGLQTGVPWIMCKQEDAPSPIIDTCNGY YCEDFKPNSINKPKMWTENWTGWYTEFGGAVPYRPVEDIAYSVARFILKGGSFVNYYMYHGGTNFDRTAGEFMASSYDYDAPLDEYGLPREPKYSHLKAL HK |
Full Sequence |
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Protein Sequence Length: 723 Download |
MGLNVRDKVS IFLAILCYSS LICSVKATVS YDRKAVIING QRRILLSGSI HYPRSTPEMW 60 PGLIQKAKEG GLDVIETYVF WNGHEPSPGN YYFGDRYDLV KFIKLVQQAG LYVNLRIGPF 120 VCAEWNFGGF PVWLKFVPGI AFRTDNEPFK AAMKKFTEKI VWMMKAERLF QTQGGPIILA 180 QIENEYGPVE WNSGAPAKAY TQWAAQMALG LQTGVPWIMC KQEDAPSPII DTCNGYYCED 240 FKPNSINKPK MWTENWTGWY TEFGGAVPYR PVEDIAYSVA RFILKGGSFV NYYMYHGGTN 300 FDRTAGEFMA SSYDYDAPLD EYGLPREPKY SHLKALHKVI KLSEPALVSA DATVTYLGAK 360 QEAHVFWSKS SCAAFLSNND VNSPARVMFR GFPYDLPPWS VSILPDCKTE YYNTAKVNAP 420 SAHRNMVSTG TRFSWESFNE VVPFANEAGT FPRNGLVEQI SMTWDKSDYF WYLTDITVGA 480 GERFLKTGDF PLLTAWSAGH ALHVFVNGQF AGRAYGSLEH TSLTFSQKIK LHAGVNKLAL 540 LSVVVGLPNV GKHFETWNKG ILGGVTLKGV NSGTWDMSKW KWSYKVGMKG EALSLHTPTA 600 SVRWNQGSFL AKNQPLTWYK SIFAAPPGNE PLAVDMNTMG KGQVWINGRN IGRHWAAYKA 660 RGNCGRCNYA GEFTATKCLS NCGEASQRWY HVPRSWLKPQ NVIVVFEEWG GDTSGISLVK 720 RI* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 0.0001 | 51 | 187 | 151 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 3.0e-22 | 29 | 339 | 359 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 1.0e-150 | 37 | 340 | 320 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 11 | 721 | 715 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK96780.1 | 0 | 1 | 721 | 1 | 723 | beta-galactosidase [Arabidopsis thaliana] |
EMBL | CAB39679.1 | 0 | 1 | 721 | 1 | 726 | putative beta-galactosidase [Arabidopsis thaliana] |
RefSeq | NP_190852.2 | 0 | 1 | 721 | 1 | 724 | BGAL2 (beta-galactosidase 2); beta-galactosidase/ catalytic/ cation binding [Arabidopsis thaliana] |
RefSeq | NP_200498.1 | 0 | 1 | 721 | 1 | 723 | BGAL4 (beta-galactosidase 4); beta-galactosidase [Arabidopsis thaliana] |
RefSeq | NP_849553.1 | 0 | 1 | 721 | 1 | 725 | BGAL12 (beta-galactosidase 12); beta-galactosidase/ catalytic/ cation binding [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 2e-39 | 26 | 336 | 5 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 1e-38 | 29 | 344 | 11 | 339 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 1e-38 | 29 | 344 | 11 | 339 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |