y
Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10010258m |
Family | GH35 |
Protein Properties | Length: 711 Molecular Weight: 80253.4 Isoelectric Point: 6.7118 |
Chromosome | Chromosome/Scaffold: 1 Start: 9437873 End: 9442295 |
Description | beta-galactosidase 12 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 36 | 338 | 0 |
LIINGQRRILFSGSIHYPRSTPEMWPDLLKKAKDGGLDIVDTYVFWNGHEPTRGKFYFEGRYDLVRFIKLAQQAGLYVTLRIGPYACAEWNFGAFPAWLK FIPGMEFRIDNQPFELEMQKWVTKIVDMLKAEKLFETQGGPIILSQIENEFELVEWNLGDRARVYGQWAAHMAIGLNITVPWIMCKQANAPDPIIDTCND FYCDWFSPNKDYKPKMWTENWTAWVQQFGTPPLYRPHEDLAYSVLKFIQTGGSMNNYYMYHGGTNFDRTNGAFVATSYDYDGVIDEYGLPSEPKWGHLSE LHK |
Full Sequence |
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Protein Sequence Length: 711 Download |
MLSPAAAKVF SLLLLFISSW EICSVKSTVT YDRKGLIING QRRILFSGSI HYPRSTPEMW 60 PDLLKKAKDG GLDIVDTYVF WNGHEPTRGK FYFEGRYDLV RFIKLAQQAG LYVTLRIGPY 120 ACAEWNFGAF PAWLKFIPGM EFRIDNQPFE LEMQKWVTKI VDMLKAEKLF ETQGGPIILS 180 QIENEFELVE WNLGDRARVY GQWAAHMAIG LNITVPWIMC KQANAPDPII DTCNDFYCDW 240 FSPNKDYKPK MWTENWTAWV QQFGTPPLYR PHEDLAYSVL KFIQTGGSMN NYYMYHGGTN 300 FDRTNGAFVA TSYDYDGVID EYGLPSEPKW GHLSELHKVI KTCEPTILNS EPTVIPLGPH 360 QEARVFNPPT GGCVAFLSNH DPNLPVNLTF WNLQYELPPW SISVLPDCRT AVYNSAIVTA 420 RKTEKKMIPF QGALQNWESY SEGTSSSDSS KTFVKYGLTE HLFLTRDTTD YLWYTTEVFI 480 DPSEGFLYNG QDPLLNIMSA GHGLNVYVND QLQGLHHGSL ETPQVTFSKK VKLRGGVNKI 540 SLQSVAVGLP NIGTQFEKWN LGVLGPVTLS GLNEGTRDLA KQNWTYKIGL EGEDLGLPFT 600 GGNSSVQWVQ GPTLAKNWPG TWYKTTFDAP EGNDPLALDM RTMSKGLIWV NGHGVGRYWS 660 ASIAYGNCSP HPCYYGGFMN NQKCLSGCGK PSQIWYHVPR SWLKPTGNLL V 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 1.0e-5 | 57 | 134 | 87 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 2.0e-20 | 29 | 335 | 358 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 8.0e-140 | 36 | 340 | 321 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 12 | 711 | 701 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK31801.1 | 0 | 5 | 711 | 15 | 718 | beta-galactosidase [Citrus sinensis] |
GenBank | AAK40304.1 | 0 | 12 | 711 | 9 | 705 | beta-galactosidase [Capsicum annuum] |
GenBank | ABK96254.1 | 0 | 23 | 711 | 27 | 714 | unknown [Populus trichocarpa x Populus deltoides] |
RefSeq | XP_002308268.1 | 0 | 19 | 711 | 18 | 707 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514108.1 | 0 | 22 | 711 | 23 | 709 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3thd_D | 2e-36 | 29 | 352 | 11 | 347 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 2e-36 | 29 | 352 | 11 | 347 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_B | 2e-36 | 29 | 352 | 11 | 347 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_A | 2e-36 | 29 | 352 | 11 | 347 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thc_D | 2e-36 | 29 | 352 | 11 | 347 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |