y
Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_021365m |
Family | GH35 |
Protein Properties | Length: 830 Molecular Weight: 91941 Isoelectric Point: 6.4644 |
Chromosome | Chromosome/Scaffold: 11882 Start: 102225 End: 107970 |
Description | beta galactosidase 1 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 27 | 329 | 0 |
TINGQRRILISGSIHYPRSTPEMWPDLIQTAKDGGLDVIETYVFWNGHEPSPGNYYFEDRYNLVKFIKLIQQSGLYAHLRIGPYVCAEWNFGGFPVWLKY VPGIEFRTDNGPFKAAMEKFTEKIVSMMKSEKLFETQGGPIILSQIENEYGPVEWEIGAPGKAYTKWAAEMAVGLGTGVPWVMCKQEDAPDPIINTCNGF YCENFKPNKDYKPKMWTENWTGWYTEFGGAVPHRPAEDLAFSVARFIQNGGSFVNYYMYHGGTNFGRTSGGLFIATSYDYDAPIDEYGLPRNPKWGHLRD LHK |
Full Sequence |
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Protein Sequence Length: 830 Download |
MFLLLLFGSW VFSSVTASVS YDHKAITING QRRILISGSI HYPRSTPEMW PDLIQTAKDG 60 GLDVIETYVF WNGHEPSPGN YYFEDRYNLV KFIKLIQQSG LYAHLRIGPY VCAEWNFGGF 120 PVWLKYVPGI EFRTDNGPFK AAMEKFTEKI VSMMKSEKLF ETQGGPIILS QIENEYGPVE 180 WEIGAPGKAY TKWAAEMAVG LGTGVPWVMC KQEDAPDPII NTCNGFYCEN FKPNKDYKPK 240 MWTENWTGWY TEFGGAVPHR PAEDLAFSVA RFIQNGGSFV NYYMYHGGTN FGRTSGGLFI 300 ATSYDYDAPI DEYGLPRNPK WGHLRDLHKA IKLCEPALVS VDPTVTSLGS NQEAHVFKSK 360 SSCAAFLANY DTKYSVKVTF GNGQYDLPPW SISILPDCKT AVFNTARVGA QSTRMKMTPV 420 GGAFSWQSYI EEAGSAYADD TTTLDGLWEQ INITRDATDY LWYMTDVKID PDEGFLKSGE 480 DPLLTIFSAG HSLQVFINGE LSGTVYGTLN NPKLTFSQNV KLTAGINKIY LLSAAVGLPN 540 VGLHFEKWNA GVLGPVTLKG LNEGTRDLSE WKWSYKIGLE GEALNLHTVT GSSSVEWTEG 600 TQLAKTRPLT WYKTTFDAPE GNDPLALDMS TMGKGQIWIN GRSIGRHWPG YIARGSCGDC 660 NYAGTFDDKK CRSNCGEPSQ RWYHIPRSWL NPSENLLVVF EEWGGDPSGI SLVKRSARSV 720 CADIFEGQPA LKNWQMIALG KIDHPQAKAH LSCPQGQKIY HIKFASYGLP QGTCGSFQQG 780 SCHAHRSYDA FEKTCVGKQS CSVTVTSEVF GGDPCPDSGK KLSVEAVCS* 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 0.0007 | 41 | 177 | 154 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 1.0e-20 | 19 | 321 | 369 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 2.0e-24 | 751 | 828 | 82 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 2.0e-165 | 25 | 331 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 3 | 829 | 827 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABV32546.1 | 0 | 14 | 829 | 23 | 836 | beta-galactosidase protein 1 [Prunus persica] |
GenBank | ABY71826.1 | 0 | 9 | 829 | 18 | 836 | beta-galactosidase [Prunus salicina] |
EMBL | CBI27912.1 | 0 | 1 | 829 | 6 | 833 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002308268.1 | 0 | 12 | 829 | 21 | 838 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514108.1 | 0 | 10 | 829 | 22 | 840 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 1.96182e-44 | 28 | 327 | 17 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.003 | 478 | 648 | 394 | 546 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_B | 9e-37 | 28 | 316 | 12 | 315 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_B | 0.0008 | 460 | 715 | 385 | 584 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_A | 9e-37 | 28 | 316 | 12 | 315 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |