y
Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr1g018200.1 |
Family | GH35 |
Protein Properties | Length: 719 Molecular Weight: 80189.6 Isoelectric Point: 6.1096 |
Chromosome | Chromosome/Scaffold: 1 Start: 5344925 End: 5349748 |
Description | beta-galactosidase 12 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 32 | 329 | 0 |
LVIDGQRRILISGSIHYPRSTPEMWPDLFQKAKDGGLDVIQTYVFWNGHEPSPGNYTLKDRLDWVKLSKLAQQAVLNVHLRMVPTFVGFPVWLKYVPGMA FRTDNEPFKAAMQKFTTKIVTMMKAESLFQTQGGPIIMSQIENEYGPVEWEIGAPGKAYTKWAAQMAVGLDTGVPWDMCKQEDAPDPVIDTCNGYYCENF TPNENFKPKMWTENWSGWYTDFGGAISHRPTEDLAYSVATFIQNRGSFVNYYMYHGGTNFGRTSSGLFIATSYDYDAPIDEYGLPNEPKWSHLKNLHK |
Full Sequence |
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Protein Sequence Length: 719 Download |
MQKEFHMLGL ILLLCLWVCG VTASVSYDHK ALVIDGQRRI LISGSIHYPR STPEMWPDLF 60 QKAKDGGLDV IQTYVFWNGH EPSPGNYTLK DRLDWVKLSK LAQQAVLNVH LRMVPTFVGF 120 PVWLKYVPGM AFRTDNEPFK AAMQKFTTKI VTMMKAESLF QTQGGPIIMS QIENEYGPVE 180 WEIGAPGKAY TKWAAQMAVG LDTGVPWDMC KQEDAPDPVI DTCNGYYCEN FTPNENFKPK 240 MWTENWSGWY TDFGGAISHR PTEDLAYSVA TFIQNRGSFV NYYMYHGGTN FGRTSSGLFI 300 ATSYDYDAPI DEYGLPNEPK WSHLKNLHKA IKQCEPALIS VDPTVTWLGN KNLEAHVYYV 360 NTSICAAFLA NYDTKSAATV TFGNGQYDLP PWSVSILPDC KTVVFNTATV NGHSFHKRMT 420 PVETTFDWQS YSEEPAYSSD DDSIIANALW EQINVTRDSS DYLWYLTDVN ISPSESFIKN 480 GQFPTLTINS AGHVLHVFVN GQLSGTVYGG LDNPKVTFSE SVNLKVGNNK ISLLSVAVGL 540 PNVGLHFETW NVGVLGPVRL KGLDEGTRDL SWQKWSYKVG LKGESLSLHT ITGSSSIDWT 600 QGSSLAKKQP LTWYKTTFDA PSGNDPVALD MSSMGKGEIW INDQSIGRHW PAYIAHGNCD 660 ECNYAGTFTN PKCRTNCGEP TQKWYHIPRS WLSSSGNVLV VLEEWGGDPT GISLVKRT* 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1874 | LacA | 1.0e-13 | 25 | 180 | 172 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 1.0e-138 | 31 | 331 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 17 | 718 | 708 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF67341.1 | 0 | 2 | 718 | 3 | 721 | beta galactosidase [Vigna radiata] |
GenBank | ABN08770.1 | 0 | 11 | 718 | 14 | 726 | Galactose-binding like [Medicago truncatula] |
GenBank | ACF22882.1 | 0 | 2 | 718 | 3 | 721 | beta-galactosidase [Glycine max] |
EMBL | CAA06309.1 | 0 | 24 | 718 | 30 | 730 | beta-galactosidase [Cicer arietinum] |
EMBL | CAA09457.1 | 0 | 1 | 717 | 1 | 722 | beta-galactosidase [Cicer arietinum] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 4e-29 | 32 | 327 | 15 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 6e-28 | 25 | 334 | 11 | 337 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 6e-28 | 25 | 334 | 11 | 337 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_B | 6e-28 | 25 | 334 | 11 | 337 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |